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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
167.8
nTPM
FANTOM5:
157.5
Scaled Tags Per Million
Pig:
123.9
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
167.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 160.9
2301
Female, age 85, both hemispheres
195.6
2188
Female, age 91, both hemispheres
168.1
2090
Male, age 80, both hemispheres
156.9
1984
Male, age 76, both hemispheres
122.9
Dorsal cochlear nucleus nTPM: 157.0
2802
Male, age 74, right hemisphere
207.7
2187
Female, age 91, both hemispheres
173.5
2378
Male, age 80, both hemispheres
154.5
2370
Male, age 61, both hemispheres
128.9
2058
Male, age 76, both hemispheres
120.6
Dorsal tegmental nucleus nTPM: 158.5
2326
Male, age 74, both hemispheres
182.0
2358
Male, age 61, both hemispheres
164.3
2083
Male, age 80, both hemispheres
161.0
1936
Male, age 76, left hemisphere
126.8
Dorsolateral tegmental area nTPM: 155.4
2337
Male, age 61, both hemispheres
186.7
2654
Male, age 80, both hemispheres
164.2
2751
Female, age 85, both hemispheres
152.2
2360
Male, age 74, both hemispheres
142.2
2141
Male, age 76, both hemispheres
131.6
Kolliker-Fuse nucleus nTPM: 167.8
2315
Male, age 76, right hemisphere
186.7
2793
Female, age 91, left hemisphere
171.7
2163
Male, age 80, both hemispheres
144.9
Lateral lemniscal nuclei nTPM: 137.1
2746
Female, age 85, left hemisphere
171.5
2169
Male, age 76, both hemispheres
164.8
2320
Female, age 91, left hemisphere
125.3
2453
Male, age 74, right hemisphere
123.7
2036
Male, age 80, both hemispheres
100.1
Lateral parabrachial nucleus nTPM: 159.3
2792
Male, age 76, both hemispheres
187.7
2013
Male, age 80, both hemispheres
173.4
2139
Female, age 85, right hemisphere
170.6
2790
Male, age 61, both hemispheres
105.7
Lateral vestibular nucleus nTPM: 151.7
2311
Male, age 80, both hemispheres
172.7
2184
Male, age 76, both hemispheres
130.8
Locus coeruleus nTPM: 148.6
2123
Female, age 91, both hemispheres
166.6
2788
Male, age 74, unknown
162.8
2720
Male, age 74, both hemispheres
161.9
2014
Male, age 55, unknown
153.2
1980
Male, age 76, both hemispheres
137.2
2162
Male, age 80, both hemispheres
130.4
2317
Female, age 72, unknown
128.4
Medial parabrachial nucleus nTPM: 146.7
2170
Female, age 91, both hemispheres
189.6
2854
Male, age 80, both hemispheres
183.3
2786
Male, age 76, both hemispheres
132.2
2463
Female, age 85, right hemisphere
121.5
2156
Male, age 61, both hemispheres
107.0
Medial periolivary nuclei nTPM: 158.2
2063
Male, age 76, both hemispheres
185.5
2171
Female, age 85, both hemispheres
157.7
2791
Male, age 74, right hemisphere
156.4
2081
Male, age 80, both hemispheres
152.4
2458
Female, age 91, both hemispheres
139.0
Motor facial nucleus nTPM: 158.8
2697
Female, age 85, both hemispheres
180.1
2062
Male, age 76, both hemispheres
178.5
2795
Female, age 91, both hemispheres
164.6
2365
Male, age 74, right hemisphere
153.9
2126
Male, age 61, both hemispheres
140.3
2327
Male, age 80, both hemispheres
135.2
Motor trigeminal nucleus nTPM: 134.4
2321
Female, age 91, both hemispheres
142.1
2309
Male, age 76, both hemispheres
141.2
2560
Male, age 74, both hemispheres
135.6
2335
Male, age 61, both hemispheres
129.7
2079
Male, age 80, both hemispheres
123.6
Nuclei of the trapezoid body nTPM: 156.7
1983
Male, age 76, both hemispheres
197.7
2159
Male, age 61, both hemispheres
160.4
2735
Female, age 85, both hemispheres
157.9
2166
Male, age 80, both hemispheres
142.9
2368
Female, age 91, both hemispheres
124.4
Nucleus raphe magnus nTPM: 153.3
2051
Male, age 76, both hemispheres
173.8
2160
Male, age 61, both hemispheres
168.3
2172
Female, age 85, both hemispheres
156.6
2328
Male, age 80, both hemispheres
146.2
2455
Male, age 74, both hemispheres
141.3
2459
Female, age 91, both hemispheres
133.9
Paramedian reticular nucleus nTPM: 160.6
2052
Male, age 76, both hemispheres
178.6
2313
Male, age 61, both hemispheres
166.1
2050
Female, age 85, both hemispheres
158.3
2057
Male, age 80, both hemispheres
139.5
Pedunculopontine tegmental nucleus nTPM: 165.3
2338
Male, age 61, both hemispheres
197.3
2334
Male, age 80, both hemispheres
174.1
1921
Female, age 85, both hemispheres
124.6
Pontine nuclei nTPM: 160.6
2727
Male, age 61, right hemisphere
196.9
2787
Female, age 85, both hemispheres
171.2
2319
Female, age 91, both hemispheres
168.6
1863
Male, age 55, unknown
167.0
1968
Male, age 76, left hemisphere
160.1
2109
Female, age 72, unknown
147.1
2454
Male, age 74, left hemisphere
139.8
2115
Male, age 80, left hemisphere
134.0
Pontine raphe nucleus nTPM: 156.2
2122
Female, age 85, midline
157.1
2853
Male, age 76, midline
155.3
Posteroventral cochlear nucleus nTPM: 160.7
2341
Male, age 80, both hemispheres
213.4
2135
Female, age 91, both hemispheres
163.0
2371
Male, age 61, both hemispheres
149.6
2752
Female, age 85, both hemispheres
146.5
2070
Male, age 76, both hemispheres
130.8
Principal sensory trigeminal nucleus nTPM: 135.8
2158
Male, age 61, both hemispheres
144.5
2324
Male, age 76, both hemispheres
140.8
2367
Female, age 91, left hemisphere
135.7
2008
Male, age 80, left hemisphere
122.2
Reticular pontine nucleus, caudal nTPM: 142.4
2092
Male, age 76, both hemispheres
160.7
2559
Male, age 74, both hemispheres
147.8
2457
Female, age 91, both hemispheres
138.0
2332
Male, age 80, right hemisphere
122.9
Reticular pontine nucleus, oral nTPM: 146.7
1939
Male, age 80, both hemispheres
153.8
2366
Female, age 91, both hemispheres
146.8
2012
Female, age 85, both hemispheres
144.8
2361
Male, age 74, both hemispheres
144.4
2167
Male, age 76, both hemispheres
143.4
Reticulotegmental nucleus nTPM: 148.8
2322
Female, age 91, both hemispheres
164.4
2325
Male, age 76, both hemispheres
145.9
2452
Male, age 74, both hemispheres
143.3
2333
Male, age 80, both hemispheres
141.5
Spinal trigeminal nucleus, oral nTPM: 128.3
2164
Male, age 80, both hemispheres
140.9
1978
Male, age 76, both hemispheres
122.1
2737
Female, age 85, both hemispheres
121.7
Subcoeruleus area nTPM: 140.7
1958
Male, age 80, both hemispheres
150.0
2369
Female, age 85, left hemisphere
147.5
2323
Female, age 91, left hemisphere
146.1
2451
Male, age 74, both hemispheres
138.5
2089
Male, age 76, left hemisphere
121.5
Superior olive nTPM: 152.6
2020
Male, age 76, both hemispheres
168.4
1875
Female, age 85, both hemispheres
165.4
2561
Female, age 91, both hemispheres
144.5
2364
Male, age 74, right hemisphere
143.1
2329
Male, age 80, right hemisphere
141.4
Ventral periolivary nuclei nTPM: 157.4
2130
Female, age 85, both hemispheres
170.4
2023
Male, age 76, both hemispheres
161.4
2165
Male, age 80, both hemispheres
151.2
2794
Female, age 91, left hemisphere
146.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 147.0
2840
Female, age 85, both hemispheres
182.3
1959
Male, age 76, both hemispheres
153.5
2161
Male, age 80, both hemispheres
152.3
2359
Male, age 61, both hemispheres
138.2
2456
Female, age 91, both hemispheres
129.3
2449
Male, age 74, both hemispheres
126.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.