We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
223.9
nTPM
FANTOM5:
174.2
Scaled Tags Per Million
Pig:
31.8
nTPM
Allen mouse:
9.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
223.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 197.2
2301
Female, age 85, both hemispheres
229.8
2188
Female, age 91, both hemispheres
227.0
2090
Male, age 80, both hemispheres
201.2
1984
Male, age 76, both hemispheres
130.7
Dorsal cochlear nucleus nTPM: 181.8
2802
Male, age 74, right hemisphere
197.0
2187
Female, age 91, both hemispheres
193.1
2058
Male, age 76, both hemispheres
183.4
2370
Male, age 61, both hemispheres
171.0
2378
Male, age 80, both hemispheres
164.3
Dorsal tegmental nucleus nTPM: 167.2
2083
Male, age 80, both hemispheres
209.7
2326
Male, age 74, both hemispheres
186.3
1936
Male, age 76, left hemisphere
159.9
2358
Male, age 61, both hemispheres
113.0
Dorsolateral tegmental area nTPM: 175.7
2751
Female, age 85, both hemispheres
237.1
2654
Male, age 80, both hemispheres
194.4
2337
Male, age 61, both hemispheres
187.2
2360
Male, age 74, both hemispheres
134.3
2141
Male, age 76, both hemispheres
125.5
Kolliker-Fuse nucleus nTPM: 171.2
2793
Female, age 91, left hemisphere
233.6
2163
Male, age 80, both hemispheres
179.9
2315
Male, age 76, right hemisphere
100.0
Lateral lemniscal nuclei nTPM: 203.2
2320
Female, age 91, left hemisphere
250.2
2746
Female, age 85, left hemisphere
213.7
2453
Male, age 74, right hemisphere
196.7
2036
Male, age 80, both hemispheres
188.4
2169
Male, age 76, both hemispheres
167.1
Lateral parabrachial nucleus nTPM: 191.2
2013
Male, age 80, both hemispheres
213.7
2792
Male, age 76, both hemispheres
198.5
2790
Male, age 61, both hemispheres
188.4
2139
Female, age 85, right hemisphere
164.3
Lateral vestibular nucleus nTPM: 205.1
2184
Male, age 76, both hemispheres
224.3
2311
Male, age 80, both hemispheres
186.0
Locus coeruleus nTPM: 128.4
2162
Male, age 80, both hemispheres
159.8
2317
Female, age 72, unknown
151.3
2720
Male, age 74, both hemispheres
139.4
2014
Male, age 55, unknown
128.1
2123
Female, age 91, both hemispheres
119.8
1980
Male, age 76, both hemispheres
109.6
2788
Male, age 74, unknown
90.5
Medial parabrachial nucleus nTPM: 204.8
2463
Female, age 85, right hemisphere
228.6
2156
Male, age 61, both hemispheres
228.4
2170
Female, age 91, both hemispheres
212.4
2786
Male, age 76, both hemispheres
205.1
2854
Male, age 80, both hemispheres
149.4
Medial periolivary nuclei nTPM: 189.1
2081
Male, age 80, both hemispheres
239.8
2458
Female, age 91, both hemispheres
220.7
2791
Male, age 74, right hemisphere
164.7
2171
Female, age 85, both hemispheres
161.6
2063
Male, age 76, both hemispheres
158.7
Motor facial nucleus nTPM: 191.3
2126
Male, age 61, both hemispheres
248.9
2697
Female, age 85, both hemispheres
203.3
2327
Male, age 80, both hemispheres
196.3
2365
Male, age 74, right hemisphere
171.1
2795
Female, age 91, both hemispheres
170.3
2062
Male, age 76, both hemispheres
158.0
Motor trigeminal nucleus nTPM: 223.9
2321
Female, age 91, both hemispheres
251.0
2560
Male, age 74, both hemispheres
240.4
2335
Male, age 61, both hemispheres
220.0
2309
Male, age 76, both hemispheres
214.2
2079
Male, age 80, both hemispheres
193.7
Nuclei of the trapezoid body nTPM: 182.3
2166
Male, age 80, both hemispheres
232.1
2159
Male, age 61, both hemispheres
194.4
2368
Female, age 91, both hemispheres
189.1
2735
Female, age 85, both hemispheres
149.0
1983
Male, age 76, both hemispheres
147.1
Nucleus raphe magnus nTPM: 179.0
2459
Female, age 91, both hemispheres
220.0
2328
Male, age 80, both hemispheres
212.9
2051
Male, age 76, both hemispheres
180.3
2455
Male, age 74, both hemispheres
172.6
2172
Female, age 85, both hemispheres
150.2
2160
Male, age 61, both hemispheres
138.3
Paramedian reticular nucleus nTPM: 174.5
2057
Male, age 80, both hemispheres
204.2
2313
Male, age 61, both hemispheres
176.7
2050
Female, age 85, both hemispheres
160.7
2052
Male, age 76, both hemispheres
156.4
Pedunculopontine tegmental nucleus nTPM: 156.5
2334
Male, age 80, both hemispheres
161.8
1921
Female, age 85, both hemispheres
159.9
2338
Male, age 61, both hemispheres
147.7
Pontine nuclei nTPM: 221.8
2115
Male, age 80, left hemisphere
264.8
2319
Female, age 91, both hemispheres
254.0
2454
Male, age 74, left hemisphere
248.4
1968
Male, age 76, left hemisphere
224.5
2109
Female, age 72, unknown
209.4
2787
Female, age 85, both hemispheres
202.8
1863
Male, age 55, unknown
201.3
2727
Male, age 61, right hemisphere
169.4
Pontine raphe nucleus nTPM: 142.4
2122
Female, age 85, midline
145.6
2853
Male, age 76, midline
139.1
Posteroventral cochlear nucleus nTPM: 221.0
2135
Female, age 91, both hemispheres
277.3
2070
Male, age 76, both hemispheres
267.0
2341
Male, age 80, both hemispheres
201.8
2371
Male, age 61, both hemispheres
200.2
2752
Female, age 85, both hemispheres
158.8
Principal sensory trigeminal nucleus nTPM: 189.1
2367
Female, age 91, left hemisphere
226.4
2324
Male, age 76, both hemispheres
190.2
2158
Male, age 61, both hemispheres
171.1
2008
Male, age 80, left hemisphere
168.6
Reticular pontine nucleus, caudal nTPM: 221.8
2559
Male, age 74, both hemispheres
257.1
2457
Female, age 91, both hemispheres
228.7
2332
Male, age 80, right hemisphere
207.0
2092
Male, age 76, both hemispheres
194.6
Reticular pontine nucleus, oral nTPM: 204.6
2366
Female, age 91, both hemispheres
234.9
2361
Male, age 74, both hemispheres
221.8
2012
Female, age 85, both hemispheres
193.7
2167
Male, age 76, both hemispheres
188.2
1939
Male, age 80, both hemispheres
184.6
Reticulotegmental nucleus nTPM: 200.2
2452
Male, age 74, both hemispheres
243.4
2322
Female, age 91, both hemispheres
211.0
2333
Male, age 80, both hemispheres
201.1
2325
Male, age 76, both hemispheres
145.1
Spinal trigeminal nucleus, oral nTPM: 192.7
1978
Male, age 76, both hemispheres
211.5
2164
Male, age 80, both hemispheres
210.6
2737
Female, age 85, both hemispheres
156.1
Subcoeruleus area nTPM: 200.0
2369
Female, age 85, left hemisphere
234.6
2451
Male, age 74, both hemispheres
225.5
2089
Male, age 76, left hemisphere
209.1
2323
Female, age 91, left hemisphere
177.7
1958
Male, age 80, both hemispheres
153.2
Superior olive nTPM: 198.8
2329
Male, age 80, right hemisphere
233.1
2561
Female, age 91, both hemispheres
221.4
2020
Male, age 76, both hemispheres
203.7
1875
Female, age 85, both hemispheres
168.3
2364
Male, age 74, right hemisphere
167.6
Ventral periolivary nuclei nTPM: 175.0
2023
Male, age 76, both hemispheres
196.3
2165
Male, age 80, both hemispheres
186.3
2794
Female, age 91, left hemisphere
178.4
2130
Female, age 85, both hemispheres
138.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 193.8
2456
Female, age 91, both hemispheres
250.7
2161
Male, age 80, both hemispheres
199.6
2449
Male, age 74, both hemispheres
187.5
1959
Male, age 76, both hemispheres
183.6
2359
Male, age 61, both hemispheres
176.6
2840
Female, age 85, both hemispheres
164.6
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
31.8
Pig sample
Sample description
nTPM
Pons nTPM: 31.8
Samples: 4
Max nTPM: 38.4
Min nTPM: 27.8
Sample A
Female
38.4
Sample B
Female
30.7
Sample C
Male
30.3
Sample D
Male
27.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
