HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:187.1 nTPM
HPA Brain:320.6 nTPM
GTEx:187.1 nTPM
FANTOM5:24.5 Scaled Tags Per Million
Pig:223.4 nTPM
Mouse:758.3 nTPM
Allen mouse:13.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060952
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 320.6
Sample id Sample description nTPM
Hippocampus
nTPM: 268.6
2621 Female, age 67, right hemisphere 381.3
2529 Female, age 94, left hemisphere 364.5
1911 Female, age 85, right hemisphere 343.6
2148 Female, age 91, left hemisphere 250.0
1898 Male, age 80, left hemisphere 156.8
1855 Male, age 76, left hemisphere 115.2
Dentate gyrus
nTPM: 212.3
2531 Female, age 67, both hemispheres 458.9
1927 Female, age 91, both hemispheres 267.7
2528 Male, age 74, both hemispheres 191.1
2246 Female, age 85, both hemispheres 184.5
2010 Male, age 76, both hemispheres 90.8
2530 Female, age 94, left hemisphere 80.6
Entorhinal gyrus
nTPM: 253.7
2613 Female, age 94, left hemisphere 362.5
2686 Male, age 75, right hemisphere 279.7
1787 Male, age 76, left hemisphere 254.5
1938 Female, age 85, left hemisphere 245.4
2764 Male, age 80, right hemisphere 233.7
2117 Female, age 91, right hemisphere 146.5
Hippocampus, CA1
nTPM: 255.1
2749 Male, age 80, left hemisphere 415.6
2527 Male, age 74, both hemispheres 289.8
2082 Female, age 91, right hemisphere 232.9
1873 Female, age 85, both hemispheres 171.2
2045 Male, age 76, both hemispheres 165.9
Hippocampus, CA2
nTPM: 187.9
2113 Female, age 91, right hemisphere 312.0
2249 Male, age 74, both hemispheres 184.4
2437 Female, age 94, left hemisphere 171.8
1940 Female, age 85, left hemisphere 171.4
1963 Male, age 80, left hemisphere 161.0
1892 Male, age 76, both hemispheres 126.7
Hippocampus, CA3
nTPM: 307.9
2137 Male, age 80, left hemisphere 496.8
2620 Female, age 94, left hemisphere 397.0
2861 Female, age 67, both hemispheres 366.2
1891 Female, age 85, both hemispheres 216.1
2436 Male, age 74, both hemispheres 199.2
1867 Male, age 76, both hemispheres 172.5
Parahippocampal cortex
nTPM: 280.6
2245 Female, age 91, both hemispheres 459.8
2250 Female, age 67, right hemisphere 385.2
1933 Female, age 85, both hemispheres 304.6
2622 Female, age 67, right hemisphere 291.6
2693 Female, age 94, both hemispheres 269.5
2018 Male, age 76, both hemispheres 240.5
1850 Male, age 80, both hemispheres 236.1
1990 Female, age 91, right hemisphere 220.2
2692 Male, age 74, both hemispheres 206.8
2532 Female, age 72, left hemisphere 192.2
Perirhinal gyrus
nTPM: 320.6
1847 Female, age 91, left hemisphere 442.2
2521 Female, age 94, right hemisphere 353.3
1794 Male, age 80, right hemisphere 302.9
1841 Female, age 85, right hemisphere 300.3
2848 Male, age 76, right hemisphere 204.2
Subiculum
nTPM: 203.3
2619 Male, age 74, both hemispheres 248.8
1901 Male, age 80, both hemispheres 231.5
1977 Female, age 85, both hemispheres 227.2
2729 Female, age 91, right hemisphere 193.7
2042 Male, age 76, both hemispheres 176.5
2438 Female, age 94, left hemisphere 141.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 187.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 187.1
Samples: 197

Max nTPM: 917.5
Min nTPM: 5.2
Std nTPM: 159.2
Median nTPM: 143.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 917.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 766.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 730.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 712.6
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 648.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 600.3
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 585.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 564.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 538.5
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 509.9
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 465.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.5
FF:10169-103B7 60 years, female 25.9
FF:10153-102I9 76 years, female 23.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 223.4
Pig sample Sample description nTPM
Subiculum
nTPM: 220.4
Samples: 4

Max nTPM: 260.2
Min nTPM: 188.6
Sample A Female 260.2
Sample B Female 235.4
Sample C Male 197.4
Sample D Male 188.6
Dorsal hippocampus
nTPM: 119.3
Samples: 4

Max nTPM: 139.8
Min nTPM: 87.8
Sample A Female 136.9
Sample B Female 139.8
Sample C Male 112.6
Sample D Male 87.8
Entorhinal cortex
nTPM: 223.4
Samples: 4

Max nTPM: 320.2
Min nTPM: 158.8
Sample A Female 225.8
Sample B Female 188.9
Sample C Male 320.2
Sample D Male 158.8
Ventral hippocampus
nTPM: 112.6
Samples: 4

Max nTPM: 150.1
Min nTPM: 61.0
Sample A Female 61.0
Sample B Female 124.5
Sample C Male 114.6
Sample D Male 150.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 758.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 559.5
Samples: 4

Max nTPM: 613.4
Min nTPM: 484.7
Sample A Male 557.7
Sample B Male 484.7
Sample C Female 613.4
Sample D Female 582.0
Hippocampal formation
nTPM: 758.3
Samples: 4

Max nTPM: 828.8
Min nTPM: 684.2
Sample A Male 800.7
Sample B Male 828.8
Sample C Female 719.4
Sample D Female 684.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.6
74579467 Antisense, RP_060215_01_D04, Mouse strain C57BL/6J (56 days, male) 17.6
71212512 Antisense, RP_050816_03_D06, Mouse strain C57BL/6J (56 days, male) 9.7
73636031 Antisense, RP_050816_03_D06, Mouse strain C57BL/6J (56 days, male) 8.9

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