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ACBD4
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  • ACBD4
PROTEIN SUMMARY SECTION OVERVIEW GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ACBD4
Synonyms FLJ13322
Gene descriptioni

Full gene name according to HGNC.

Acyl-CoA binding domain containing 4
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 17
Cytoband q21.31
Chromosome location (bp) 45132600 - 45144181
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000181513 (version 109)
Entrez gene 79777
HGNC HGNC:23337
UniProt Q8NC06 (UniProt - Evidence at protein level)
neXtProt NX_Q8NC06
GeneCards ACBD4
Antibodypedia ACBD4 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Binds medium- and long-chain acyl-CoA esters and may function as an intracellular carrier of acyl-CoA esters.... show less
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Lipid-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a member of the acyl-coenzyme A binding domain containing protein family. All family members contain the conserved acyl-Coenzyme A binding domain, which binds acyl-CoA thiol esters. They are thought to play roles in acyl-CoA dependent lipid metabolism. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The ENSP identifier links to the Ensembl website protein summary, while the ENST identifier links to the Ensembl website transcript summary for the selected splice variant. The data in the UniProt column can be expanded to show links to all matching UniProt identifiers for this protein.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The Gene Ontology terms assigned to this protein are listed if expanding the Gene ontology column. The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide (according to a majority of the signal peptide predictors SPOCTOPUS, SignalP 4.0, and Phobius) and the number of predicted transmembrane region(s) (according to MDM) are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ACBD4-201
ENSP00000314440
ENST00000321854
Q8NC06
[Direct mapping] Acyl-CoA-binding domain-containing protein 4
Show all
A0A0S2Z5Q0
[Target identity:100%; Query identity:100%] Acyl-CoA binding domain containing 4 isoform 3
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000062 [fatty-acyl-CoA binding]
GO:0005737 [cytoplasm]
GO:0006631 [fatty acid metabolic process]
GO:0008289 [lipid binding]
GO:0016020 [membrane]
Show all
305 aa
34.8 kDa
No 1
ACBD4-202
ENSP00000366154
ENST00000376955
Q8NC06
[Direct mapping] Acyl-CoA-binding domain-containing protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000062 [fatty-acyl-CoA binding]
GO:0005737 [cytoplasm]
GO:0006631 [fatty acid metabolic process]
GO:0008289 [lipid binding]
Show all
268 aa
30.3 kDa
No 0
ACBD4-203
ENSP00000381367
ENST00000398322
Q8NC06
[Direct mapping] Acyl-CoA-binding domain-containing protein 4
Show all
A0A0S2Z5Q0
[Target identity:100%; Query identity:100%] Acyl-CoA binding domain containing 4 isoform 3
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000062 [fatty-acyl-CoA binding]
GO:0005737 [cytoplasm]
GO:0006631 [fatty acid metabolic process]
GO:0008289 [lipid binding]
GO:0016020 [membrane]
Show all
305 aa
34.8 kDa
No 1
ACBD4-204
ENSP00000405969
ENST00000431281
Q8NC06
[Direct mapping] Acyl-CoA-binding domain-containing protein 4
Show all
A0A0S2Z5Y4
[Target identity:100%; Query identity:100%] Acyl-CoA binding domain containing 4 isoform 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000062 [fatty-acyl-CoA binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0006631 [fatty acid metabolic process]
GO:0008289 [lipid binding]
Show all
341 aa
37.8 kDa
No 0
ACBD4-207
ENSP00000465484
ENST00000586346
Q8NC06
[Direct mapping] Acyl-CoA-binding domain-containing protein 4
Show all
A0A0S2Z5Y4
[Target identity:100%; Query identity:100%] Acyl-CoA binding domain containing 4 isoform 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000062 [fatty-acyl-CoA binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0006631 [fatty acid metabolic process]
GO:0008289 [lipid binding]
Show all
341 aa
37.8 kDa
No 0
ACBD4-214
ENSP00000465610
ENST00000591859
Q8NC06
[Direct mapping] Acyl-CoA-binding domain-containing protein 4
Show all
A0A0S2Z5Y4
[Target identity:100%; Query identity:100%] Acyl-CoA binding domain containing 4 isoform 1
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000062 [fatty-acyl-CoA binding]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0006631 [fatty acid metabolic process]
GO:0008289 [lipid binding]
Show all
341 aa
37.8 kDa
No 0
ACBD4-215
ENSP00000466305
ENST00000592162
K7EM05
[Direct mapping] Acyl-CoA binding domain containing 4 isoform 4; Acyl-CoA-binding domain-containing protein 4; Acyl-Coenzyme A binding domain containing 4, isoform CRA_b
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000062 [fatty-acyl-CoA binding]
GO:0005515 [protein binding]
Show all
269 aa
29.7 kDa
No 0
ACBD4-216
ENSP00000482750
ENST00000619916
Q8NC06
[Direct mapping] Acyl-CoA-binding domain-containing protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000062 [fatty-acyl-CoA binding]
GO:0005737 [cytoplasm]
GO:0006631 [fatty acid metabolic process]
GO:0008289 [lipid binding]
Show all
268 aa
30.3 kDa
No 0

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