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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
41.6
nTPM
Monaco:
24.0
nTPM
Schmiedel:
41.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
41.6
HPA sample
nTPM
gdT-cell nTPM: 39.3
Samples: 6
Max nTPM: 44.5
Min nTPM: 32.9
P10809_1007
32.9
P10809_1022
37.4
P10809_1041
44.5
P10809_1060
41.4
P10809_1077
43.9
P10809_1098
35.7
MAIT T-cell nTPM: 41.3
Samples: 6
Max nTPM: 54.7
Min nTPM: 32.8
P10809_1006
37.8
P10809_1024
39.9
P10809_1043
33.4
P10809_1062
49.4
P10809_1083
32.8
P10809_1097
54.7
Memory CD4 T-cell nTPM: 39.0
Samples: 6
Max nTPM: 46.4
Min nTPM: 29.8
P10809_1014
29.8
P10809_1026
46.4
P10809_1045
45.2
P10809_1064
38.8
P10809_1086
36.9
P10809_1113
36.8
Memory CD8 T-cell nTPM: 39.9
Samples: 5
Max nTPM: 46.8
Min nTPM: 33.0
P10809_1012
33.0
P10809_1027
34.5
P10809_1046
46.0
P10809_1065
39.2
P10809_1111
46.8
Naive CD4 T-cell nTPM: 41.4
Samples: 6
Max nTPM: 56.9
Min nTPM: 28.6
P10809_1015
28.6
P10809_1030
51.4
P10809_1049
39.3
P10809_1068
56.9
P10809_1085
32.9
P10809_1112
39.2
Naive CD8 T-cell nTPM: 41.6
Samples: 6
Max nTPM: 54.1
Min nTPM: 34.1
P10809_1016
38.3
P10809_1031
54.1
P10809_1050
44.0
P10809_1069
39.7
P10809_1087
39.6
P10809_1110
34.1
T-reg nTPM: 41.4
Samples: 6
Max nTPM: 56.0
Min nTPM: 29.6
P10809_1018
46.6
P10809_1037
46.8
P10809_1056
56.0
P10809_1075
30.9
P10809_1094
29.6
P10809_1106
38.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
24.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 11.0
Samples: 4
Max nTPM: 16.0
Min nTPM: 6.7
RHH5202_R3573
6.7
RHH5230_R3602
8.9
RHH5259_R3631
12.5
RHH5288_R3660
16.0
Effector memory CD8 T-cell nTPM: 11.2
Samples: 4
Max nTPM: 13.1
Min nTPM: 9.0
RHH5203_R3574
12.4
RHH5231_R3603
13.1
RHH5260_R3632
9.0
RHH5289_R3661
10.4
MAIT T-cell nTPM: 17.2
Samples: 4
Max nTPM: 24.7
Min nTPM: 10.6
RHH5233_R3605
10.6
RHH5205_R3576
15.0
RHH5262_R3634
18.6
RHH5297_R3663
24.7
Memory CD4 T-cell TFH nTPM: 18.0
Samples: 4
Max nTPM: 20.3
Min nTPM: 15.9
RHH5300_R3666
17.1
RHH5236_R3608
20.3
RHH5265_R3637
15.9
RHH5208_R3579
18.8
Memory CD4 T-cell Th1 nTPM: 16.5
Samples: 4
Max nTPM: 33.5
Min nTPM: 7.6
RHH5210_R3581
12.9
RHH5302_R3668
33.5
RHH5238_R3610
7.6
RHH5267_R3639
12.1
Memory CD4 T-cell Th1/Th17 nTPM: 19.5
Samples: 4
Max nTPM: 31.0
Min nTPM: 3.9
RHH5303_R3669
31.0
RHH5211_R3582
25.7
RHH5239_R3611
3.9
RHH5268_R3640
17.2
Memory CD4 T-cell Th17 nTPM: 11.5
Samples: 4
Max nTPM: 20.2
Min nTPM: 5.0
RHH5304_R3670
11.1
RHH5212_R3583
20.2
RHH5240_R3612
5.0
RHH5269_R3641
9.5
Memory CD4 T-cell Th2 nTPM: 15.2
Samples: 4
Max nTPM: 19.2
Min nTPM: 12.2
RHH5305_R3671
14.0
RHH5213_R3584
15.2
RHH5241_R3613
19.2
RHH5270_R3642
12.2
Naive CD4 T-cell nTPM: 18.8
Samples: 4
Max nTPM: 26.6
Min nTPM: 7.1
RHH5306_R3672
26.6
RHH5214_R3585
20.4
RHH5242_R3614
7.1
RHH5271_R3643
20.9
Naive CD8 T-cell nTPM: 20.7
Samples: 4
Max nTPM: 34.1
Min nTPM: 10.9
RHH5201_R3572
34.1
RHH5229_R3601
10.9
RHH5258_R3630
20.7
RHH5287_R3659
17.0
Non-Vd2 gdTCR nTPM: 15.0
Samples: 4
Max nTPM: 25.5
Min nTPM: 6.4
RHH5235_R3607
6.4
RHH5264_R3636
16.2
RHH5207_R3578
11.9
RHH5299_R3665
25.5
T-reg nTPM: 24.0
Samples: 4
Max nTPM: 43.9
Min nTPM: 12.5
RHH5301_R3667
43.9
RHH5237_R3609
22.7
RHH5266_R3638
16.8
RHH5209_R3580
12.5
Terminal effector memory CD4 T-cell nTPM: 12.0
Samples: 2
Max nTPM: 16.7
Min nTPM: 7.3
RHH5243_R3615
7.3
RHH5272_R3644
16.7
Terminal effector memory CD8 T-cell nTPM: 21.3
Samples: 4
Max nTPM: 27.1
Min nTPM: 15.9
RHH5232_R3604
15.9
RHH5204_R3575
27.1
RHH5261_R3633
17.7
RHH5296_R3662
24.5
Vd2 gdTCR nTPM: 15.9
Samples: 4
Max nTPM: 26.3
Min nTPM: 9.5
RHH5234_R3606
9.5
RHH5206_R3577
15.2
RHH5263_R3635
12.6
RHH5298_R3664
26.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
