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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
53.7
nTPM
Monaco:
142.4
nTPM
Schmiedel:
92.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
53.7
HPA sample
nTPM
gdT-cell nTPM: 44.3
Samples: 6
Max nTPM: 53.8
Min nTPM: 34.7
P10809_1007
44.4
P10809_1022
50.8
P10809_1041
53.8
P10809_1060
40.3
P10809_1077
34.7
P10809_1098
41.5
MAIT T-cell nTPM: 53.7
Samples: 6
Max nTPM: 72.1
Min nTPM: 31.0
P10809_1006
55.4
P10809_1024
55.6
P10809_1043
72.1
P10809_1062
58.5
P10809_1083
31.0
P10809_1097
49.7
Memory CD4 T-cell nTPM: 39.9
Samples: 6
Max nTPM: 52.3
Min nTPM: 24.1
P10809_1014
46.2
P10809_1026
44.9
P10809_1045
52.3
P10809_1064
24.1
P10809_1086
34.8
P10809_1113
37.2
Memory CD8 T-cell nTPM: 43.8
Samples: 5
Max nTPM: 53.8
Min nTPM: 31.9
P10809_1012
48.5
P10809_1027
53.8
P10809_1046
47.3
P10809_1065
37.7
P10809_1111
31.9
Naive CD4 T-cell nTPM: 30.1
Samples: 6
Max nTPM: 36.3
Min nTPM: 26.0
P10809_1015
32.7
P10809_1030
27.5
P10809_1049
26.0
P10809_1068
28.2
P10809_1085
36.3
P10809_1112
29.6
Naive CD8 T-cell nTPM: 36.3
Samples: 6
Max nTPM: 43.5
Min nTPM: 21.9
P10809_1016
39.1
P10809_1031
43.5
P10809_1050
40.3
P10809_1069
34.5
P10809_1087
38.7
P10809_1110
21.9
T-reg nTPM: 43.9
Samples: 6
Max nTPM: 63.2
Min nTPM: 29.4
P10809_1018
44.4
P10809_1037
56.5
P10809_1056
39.9
P10809_1075
29.4
P10809_1094
63.2
P10809_1106
30.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
142.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 87.3
Samples: 4
Max nTPM: 100.1
Min nTPM: 73.4
RHH5202_R3573
84.9
RHH5230_R3602
73.4
RHH5259_R3631
100.1
RHH5288_R3660
90.9
Effector memory CD8 T-cell nTPM: 124.8
Samples: 4
Max nTPM: 143.3
Min nTPM: 97.5
RHH5203_R3574
143.3
RHH5231_R3603
97.5
RHH5260_R3632
138.1
RHH5289_R3661
120.1
MAIT T-cell nTPM: 142.4
Samples: 4
Max nTPM: 171.7
Min nTPM: 107.8
RHH5233_R3605
107.8
RHH5205_R3576
171.7
RHH5262_R3634
158.4
RHH5297_R3663
131.6
Memory CD4 T-cell TFH nTPM: 95.8
Samples: 4
Max nTPM: 111.0
Min nTPM: 67.4
RHH5300_R3666
111.0
RHH5236_R3608
67.4
RHH5265_R3637
100.6
RHH5208_R3579
104.3
Memory CD4 T-cell Th1 nTPM: 98.3
Samples: 4
Max nTPM: 110.7
Min nTPM: 92.1
RHH5210_R3581
97.9
RHH5302_R3668
110.7
RHH5238_R3610
92.6
RHH5267_R3639
92.1
Memory CD4 T-cell Th1/Th17 nTPM: 129.1
Samples: 4
Max nTPM: 141.6
Min nTPM: 119.5
RHH5303_R3669
141.6
RHH5211_R3582
121.9
RHH5239_R3611
133.3
RHH5268_R3640
119.5
Memory CD4 T-cell Th17 nTPM: 138.0
Samples: 4
Max nTPM: 164.4
Min nTPM: 89.8
RHH5304_R3670
145.3
RHH5212_R3583
89.8
RHH5240_R3612
164.4
RHH5269_R3641
152.3
Memory CD4 T-cell Th2 nTPM: 119.2
Samples: 4
Max nTPM: 152.1
Min nTPM: 81.8
RHH5305_R3671
109.1
RHH5213_R3584
152.1
RHH5241_R3613
81.8
RHH5270_R3642
133.9
Naive CD4 T-cell nTPM: 76.4
Samples: 4
Max nTPM: 78.2
Min nTPM: 74.5
RHH5306_R3672
78.2
RHH5214_R3585
77.7
RHH5242_R3614
74.5
RHH5271_R3643
75.2
Naive CD8 T-cell nTPM: 88.8
Samples: 4
Max nTPM: 110.6
Min nTPM: 73.8
RHH5201_R3572
79.1
RHH5229_R3601
110.6
RHH5258_R3630
73.8
RHH5287_R3659
91.7
Non-Vd2 gdTCR nTPM: 120.6
Samples: 4
Max nTPM: 152.8
Min nTPM: 94.3
RHH5235_R3607
94.3
RHH5264_R3636
130.0
RHH5207_R3578
152.8
RHH5299_R3665
105.3
T-reg nTPM: 91.8
Samples: 4
Max nTPM: 112.5
Min nTPM: 66.2
RHH5301_R3667
93.0
RHH5237_R3609
66.2
RHH5266_R3638
112.5
RHH5209_R3580
95.4
Terminal effector memory CD4 T-cell nTPM: 119.2
Samples: 2
Max nTPM: 141.5
Min nTPM: 96.8
RHH5243_R3615
96.8
RHH5272_R3644
141.5
Terminal effector memory CD8 T-cell nTPM: 110.7
Samples: 4
Max nTPM: 133.4
Min nTPM: 85.3
RHH5232_R3604
90.6
RHH5204_R3575
85.3
RHH5261_R3633
133.4
RHH5296_R3662
133.4
Vd2 gdTCR nTPM: 116.6
Samples: 4
Max nTPM: 154.3
Min nTPM: 101.7
RHH5234_R3606
101.7
RHH5206_R3577
108.6
RHH5263_R3635
154.3
RHH5298_R3664
101.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
