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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
172.8
nTPM
Monaco:
71.4
nTPM
Schmiedel:
60.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
172.8
HPA sample
nTPM
gdT-cell nTPM: 125.6
Samples: 6
Max nTPM: 144.5
Min nTPM: 101.1
P10809_1007
101.1
P10809_1022
144.1
P10809_1041
131.4
P10809_1060
120.5
P10809_1077
112.1
P10809_1098
144.5
MAIT T-cell nTPM: 139.2
Samples: 6
Max nTPM: 187.8
Min nTPM: 91.4
P10809_1006
91.4
P10809_1024
165.9
P10809_1043
153.4
P10809_1062
131.5
P10809_1083
105.3
P10809_1097
187.8
Memory CD4 T-cell nTPM: 125.5
Samples: 6
Max nTPM: 153.2
Min nTPM: 87.5
P10809_1014
87.5
P10809_1026
153.2
P10809_1045
145.7
P10809_1064
116.5
P10809_1086
111.2
P10809_1113
138.7
Memory CD8 T-cell nTPM: 132.1
Samples: 5
Max nTPM: 148.9
Min nTPM: 86.5
P10809_1012
86.5
P10809_1027
135.2
P10809_1046
148.9
P10809_1065
144.0
P10809_1111
145.7
Naive CD4 T-cell nTPM: 112.5
Samples: 6
Max nTPM: 171.0
Min nTPM: 63.3
P10809_1015
63.3
P10809_1030
119.5
P10809_1049
171.0
P10809_1068
116.8
P10809_1085
89.6
P10809_1112
114.5
Naive CD8 T-cell nTPM: 121.1
Samples: 6
Max nTPM: 142.0
Min nTPM: 87.2
P10809_1016
87.2
P10809_1031
122.9
P10809_1050
127.8
P10809_1069
142.0
P10809_1087
123.3
P10809_1110
123.1
T-reg nTPM: 172.8
Samples: 6
Max nTPM: 292.0
Min nTPM: 99.5
P10809_1018
99.5
P10809_1037
154.9
P10809_1056
292.0
P10809_1075
144.0
P10809_1094
132.9
P10809_1106
213.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
71.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 53.3
Samples: 4
Max nTPM: 89.1
Min nTPM: 33.8
RHH5202_R3573
39.5
RHH5230_R3602
33.8
RHH5259_R3631
50.8
RHH5288_R3660
89.1
Effector memory CD8 T-cell nTPM: 35.0
Samples: 4
Max nTPM: 45.5
Min nTPM: 27.8
RHH5203_R3574
36.4
RHH5231_R3603
45.5
RHH5260_R3632
30.4
RHH5289_R3661
27.8
MAIT T-cell nTPM: 49.9
Samples: 4
Max nTPM: 68.5
Min nTPM: 38.9
RHH5233_R3605
48.6
RHH5205_R3576
38.9
RHH5262_R3634
43.6
RHH5297_R3663
68.5
Memory CD4 T-cell TFH nTPM: 52.5
Samples: 4
Max nTPM: 78.9
Min nTPM: 37.0
RHH5300_R3666
51.8
RHH5236_R3608
78.9
RHH5265_R3637
42.3
RHH5208_R3579
37.0
Memory CD4 T-cell Th1 nTPM: 53.3
Samples: 4
Max nTPM: 83.0
Min nTPM: 29.4
RHH5210_R3581
29.4
RHH5302_R3668
83.0
RHH5238_R3610
59.2
RHH5267_R3639
41.4
Memory CD4 T-cell Th1/Th17 nTPM: 52.5
Samples: 4
Max nTPM: 83.2
Min nTPM: 28.7
RHH5303_R3669
83.2
RHH5211_R3582
59.6
RHH5239_R3611
28.7
RHH5268_R3640
38.4
Memory CD4 T-cell Th17 nTPM: 37.9
Samples: 4
Max nTPM: 51.6
Min nTPM: 22.3
RHH5304_R3670
34.9
RHH5212_R3583
51.6
RHH5240_R3612
42.6
RHH5269_R3641
22.3
Memory CD4 T-cell Th2 nTPM: 47.1
Samples: 4
Max nTPM: 49.3
Min nTPM: 42.7
RHH5305_R3671
49.3
RHH5213_R3584
47.3
RHH5241_R3613
49.1
RHH5270_R3642
42.7
Naive CD4 T-cell nTPM: 41.0
Samples: 4
Max nTPM: 59.0
Min nTPM: 26.0
RHH5306_R3672
44.0
RHH5214_R3585
59.0
RHH5242_R3614
35.0
RHH5271_R3643
26.0
Naive CD8 T-cell nTPM: 38.2
Samples: 4
Max nTPM: 49.9
Min nTPM: 26.1
RHH5201_R3572
35.9
RHH5229_R3601
26.1
RHH5258_R3630
49.9
RHH5287_R3659
40.8
Non-Vd2 gdTCR nTPM: 60.4
Samples: 4
Max nTPM: 98.6
Min nTPM: 33.7
RHH5235_R3607
33.7
RHH5264_R3636
64.0
RHH5207_R3578
45.4
RHH5299_R3665
98.6
T-reg nTPM: 52.6
Samples: 4
Max nTPM: 70.9
Min nTPM: 34.9
RHH5301_R3667
70.9
RHH5237_R3609
51.3
RHH5266_R3638
34.9
RHH5209_R3580
53.1
Terminal effector memory CD4 T-cell nTPM: 42.6
Samples: 2
Max nTPM: 51.4
Min nTPM: 33.8
RHH5243_R3615
33.8
RHH5272_R3644
51.4
Terminal effector memory CD8 T-cell nTPM: 71.4
Samples: 4
Max nTPM: 135.1
Min nTPM: 40.7
RHH5232_R3604
40.7
RHH5204_R3575
135.1
RHH5261_R3633
56.3
RHH5296_R3662
53.4
Vd2 gdTCR nTPM: 70.8
Samples: 4
Max nTPM: 99.0
Min nTPM: 42.1
RHH5234_R3606
43.7
RHH5206_R3577
98.2
RHH5263_R3635
42.1
RHH5298_R3664
99.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
