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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
61.4
nTPM
Monaco:
98.6
nTPM
Schmiedel:
116.6
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
61.4
HPA sample
nTPM
gdT-cell nTPM: 12.9
Samples: 6
Max nTPM: 16.2
Min nTPM: 8.5
P10809_1007
11.1
P10809_1022
11.3
P10809_1041
8.5
P10809_1060
16.2
P10809_1077
14.7
P10809_1098
15.4
MAIT T-cell nTPM: 23.2
Samples: 6
Max nTPM: 28.9
Min nTPM: 10.7
P10809_1006
26.2
P10809_1024
28.8
P10809_1043
28.9
P10809_1062
24.2
P10809_1083
10.7
P10809_1097
20.6
Memory CD4 T-cell nTPM: 31.0
Samples: 6
Max nTPM: 41.3
Min nTPM: 17.7
P10809_1014
41.3
P10809_1026
36.6
P10809_1045
35.4
P10809_1064
25.1
P10809_1086
17.7
P10809_1113
29.6
Memory CD8 T-cell nTPM: 20.3
Samples: 5
Max nTPM: 36.9
Min nTPM: 8.8
P10809_1012
36.9
P10809_1027
8.9
P10809_1046
19.8
P10809_1065
8.8
P10809_1111
27.3
Naive CD4 T-cell nTPM: 43.4
Samples: 6
Max nTPM: 55.9
Min nTPM: 26.7
P10809_1015
52.2
P10809_1030
26.7
P10809_1049
55.9
P10809_1068
46.1
P10809_1085
36.8
P10809_1112
42.9
Naive CD8 T-cell nTPM: 32.4
Samples: 6
Max nTPM: 57.8
Min nTPM: 11.5
P10809_1016
57.8
P10809_1031
20.6
P10809_1050
42.4
P10809_1069
22.0
P10809_1087
11.5
P10809_1110
39.8
T-reg nTPM: 61.4
Samples: 6
Max nTPM: 90.8
Min nTPM: 45.8
P10809_1018
60.7
P10809_1037
59.9
P10809_1056
90.8
P10809_1075
59.7
P10809_1094
51.7
P10809_1106
45.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
98.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 57.1
Samples: 4
Max nTPM: 70.8
Min nTPM: 45.6
RHH5202_R3573
70.8
RHH5230_R3602
62.4
RHH5259_R3631
49.6
RHH5288_R3660
45.6
Effector memory CD8 T-cell nTPM: 39.3
Samples: 4
Max nTPM: 62.5
Min nTPM: 30.3
RHH5203_R3574
62.5
RHH5231_R3603
33.7
RHH5260_R3632
30.3
RHH5289_R3661
30.6
MAIT T-cell nTPM: 60.5
Samples: 4
Max nTPM: 81.0
Min nTPM: 38.1
RHH5233_R3605
81.0
RHH5205_R3576
38.1
RHH5262_R3634
62.7
RHH5297_R3663
60.3
Memory CD4 T-cell TFH nTPM: 87.4
Samples: 4
Max nTPM: 130.6
Min nTPM: 62.8
RHH5300_R3666
63.5
RHH5236_R3608
92.5
RHH5265_R3637
62.8
RHH5208_R3579
130.6
Memory CD4 T-cell Th1 nTPM: 69.7
Samples: 4
Max nTPM: 92.4
Min nTPM: 56.0
RHH5210_R3581
92.4
RHH5302_R3668
65.1
RHH5238_R3610
56.0
RHH5267_R3639
65.3
Memory CD4 T-cell Th1/Th17 nTPM: 65.1
Samples: 4
Max nTPM: 90.3
Min nTPM: 47.9
RHH5303_R3669
54.8
RHH5211_R3582
90.3
RHH5239_R3611
47.9
RHH5268_R3640
67.2
Memory CD4 T-cell Th17 nTPM: 46.3
Samples: 4
Max nTPM: 69.3
Min nTPM: 35.4
RHH5304_R3670
44.1
RHH5212_R3583
69.3
RHH5240_R3612
35.4
RHH5269_R3641
36.4
Memory CD4 T-cell Th2 nTPM: 39.0
Samples: 4
Max nTPM: 57.1
Min nTPM: 28.8
RHH5305_R3671
30.7
RHH5213_R3584
57.1
RHH5241_R3613
39.3
RHH5270_R3642
28.8
Naive CD4 T-cell nTPM: 77.6
Samples: 4
Max nTPM: 99.3
Min nTPM: 51.2
RHH5306_R3672
51.2
RHH5214_R3585
99.3
RHH5242_R3614
95.4
RHH5271_R3643
64.3
Naive CD8 T-cell nTPM: 83.4
Samples: 4
Max nTPM: 125.4
Min nTPM: 59.7
RHH5201_R3572
125.4
RHH5229_R3601
61.7
RHH5258_R3630
86.7
RHH5287_R3659
59.7
Non-Vd2 gdTCR nTPM: 28.1
Samples: 4
Max nTPM: 36.3
Min nTPM: 20.5
RHH5235_R3607
36.3
RHH5264_R3636
28.3
RHH5207_R3578
27.3
RHH5299_R3665
20.5
T-reg nTPM: 98.6
Samples: 4
Max nTPM: 146.4
Min nTPM: 76.0
RHH5301_R3667
76.0
RHH5237_R3609
86.1
RHH5266_R3638
85.7
RHH5209_R3580
146.4
Terminal effector memory CD4 T-cell nTPM: 24.4
Samples: 2
Max nTPM: 27.1
Min nTPM: 21.7
RHH5243_R3615
27.1
RHH5272_R3644
21.7
Terminal effector memory CD8 T-cell nTPM: 27.5
Samples: 4
Max nTPM: 36.0
Min nTPM: 13.0
RHH5232_R3604
36.0
RHH5204_R3575
30.1
RHH5261_R3633
13.0
RHH5296_R3662
30.9
Vd2 gdTCR nTPM: 51.7
Samples: 4
Max nTPM: 57.9
Min nTPM: 45.8
RHH5234_R3606
51.9
RHH5206_R3577
51.2
RHH5263_R3635
57.9
RHH5298_R3664
45.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
