HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:15.2 nTPM
HPA Brain:10.5 nTPM
GTEx:15.2 nTPM
FANTOM5:133.0 Scaled Tags Per Million
Pig:76.1 nTPM
Mouse:25.0 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043752Antibody HPA050345
Glial cells Not detectedNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.5
Sample id Sample description nTPM
Hippocampus
nTPM: 9.6
1898 Male, age 80, left hemisphere 11.1
2621 Female, age 67, right hemisphere 10.0
2148 Female, age 91, left hemisphere 9.9
1855 Male, age 76, left hemisphere 9.6
1911 Female, age 85, right hemisphere 9.0
2529 Female, age 94, left hemisphere 8.2
Dentate gyrus
nTPM: 9.7
2010 Male, age 76, both hemispheres 11.2
1927 Female, age 91, both hemispheres 11.0
2246 Female, age 85, both hemispheres 9.5
2530 Female, age 94, left hemisphere 9.2
2528 Male, age 74, both hemispheres 8.8
2531 Female, age 67, both hemispheres 8.6
Entorhinal gyrus
nTPM: 8.8
1787 Male, age 76, left hemisphere 9.6
2117 Female, age 91, right hemisphere 9.2
2764 Male, age 80, right hemisphere 8.7
1938 Female, age 85, left hemisphere 8.6
2613 Female, age 94, left hemisphere 8.6
2686 Male, age 75, right hemisphere 8.3
Hippocampus, CA1
nTPM: 10.5
2749 Male, age 80, left hemisphere 15.9
1873 Female, age 85, both hemispheres 9.5
2527 Male, age 74, both hemispheres 9.3
2045 Male, age 76, both hemispheres 9.2
2082 Female, age 91, right hemisphere 8.6
Hippocampus, CA2
nTPM: 10.1
1892 Male, age 76, both hemispheres 12.2
1963 Male, age 80, left hemisphere 12.2
2249 Male, age 74, both hemispheres 9.4
2113 Female, age 91, right hemisphere 9.2
1940 Female, age 85, left hemisphere 8.8
2437 Female, age 94, left hemisphere 8.6
Hippocampus, CA3
nTPM: 10.2
2137 Male, age 80, left hemisphere 11.9
2436 Male, age 74, both hemispheres 10.6
1867 Male, age 76, both hemispheres 10.3
2620 Female, age 94, left hemisphere 9.6
2861 Female, age 67, both hemispheres 9.6
1891 Female, age 85, both hemispheres 9.5
Parahippocampal cortex
nTPM: 9.1
2692 Male, age 74, both hemispheres 10.0
1933 Female, age 85, both hemispheres 9.7
1990 Female, age 91, right hemisphere 9.3
2622 Female, age 67, right hemisphere 9.3
2018 Male, age 76, both hemispheres 9.2
2532 Female, age 72, left hemisphere 9.1
2693 Female, age 94, both hemispheres 9.0
2250 Female, age 67, right hemisphere 8.8
1850 Male, age 80, both hemispheres 8.7
2245 Female, age 91, both hemispheres 8.3
Perirhinal gyrus
nTPM: 9.1
1847 Female, age 91, left hemisphere 10.0
1841 Female, age 85, right hemisphere 9.7
1794 Male, age 80, right hemisphere 9.2
2848 Male, age 76, right hemisphere 8.6
2521 Female, age 94, right hemisphere 8.3
Subiculum
nTPM: 9.4
1901 Male, age 80, both hemispheres 10.6
2619 Male, age 74, both hemispheres 10.0
2438 Female, age 94, left hemisphere 9.5
1977 Female, age 85, both hemispheres 9.2
2729 Female, age 91, right hemisphere 9.2
2042 Male, age 76, both hemispheres 8.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.2
Samples: 197

Max nTPM: 36.2
Min nTPM: 5.2
Std nTPM: 4.6
Median nTPM: 15.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 36.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 30.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 29.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 28.2
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 26.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 25.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 24.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 24.1
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 23.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 23.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 23.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 133.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 133.0
FF:10169-103B7 60 years, female 181.7
FF:10153-102I9 76 years, female 84.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 76.1
Pig sample Sample description nTPM
Subiculum
nTPM: 63.4
Samples: 4

Max nTPM: 74.3
Min nTPM: 58.0
Sample A Female 74.3
Sample B Female 59.2
Sample C Male 61.9
Sample D Male 58.0
Dorsal hippocampus
nTPM: 76.2
Samples: 4

Max nTPM: 91.5
Min nTPM: 66.9
Sample A Female 91.5
Sample B Female 72.9
Sample C Male 73.3
Sample D Male 66.9
Entorhinal cortex
nTPM: 74.3
Samples: 4

Max nTPM: 85.7
Min nTPM: 67.6
Sample A Female 73.3
Sample B Female 85.7
Sample C Male 70.7
Sample D Male 67.6
Ventral hippocampus
nTPM: 69.7
Samples: 4

Max nTPM: 74.9
Min nTPM: 58.6
Sample A Female 74.1
Sample B Female 58.6
Sample C Male 74.9
Sample D Male 71.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 24.1
Samples: 4

Max nTPM: 26.6
Min nTPM: 21.9
Sample A Male 22.7
Sample B Male 26.6
Sample C Female 25.0
Sample D Female 21.9
Hippocampal formation
nTPM: 25.0
Samples: 4

Max nTPM: 30.1
Min nTPM: 20.3
Sample A Male 30.1
Sample B Male 23.8
Sample C Female 20.3
Sample D Female 25.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
68162218 Antisense, RP_041122_01_H06, Mouse strain C57BL/6J (56 days, male) 0.1

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