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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
30.4
nTPM
Monaco:
34.2
nTPM
Schmiedel:
144.6
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
30.4
HPA sample
nTPM
gdT-cell nTPM: 19.8
Samples: 6
Max nTPM: 32.0
Min nTPM: 10.1
P10809_1007
31.6
P10809_1022
10.1
P10809_1041
13.1
P10809_1060
11.6
P10809_1077
20.4
P10809_1098
32.0
MAIT T-cell nTPM: 30.4
Samples: 6
Max nTPM: 49.4
Min nTPM: 15.5
P10809_1006
31.9
P10809_1024
21.8
P10809_1043
15.5
P10809_1062
18.9
P10809_1083
44.9
P10809_1097
49.4
Memory CD4 T-cell nTPM: 26.8
Samples: 6
Max nTPM: 38.3
Min nTPM: 17.5
P10809_1014
32.6
P10809_1026
18.1
P10809_1045
17.5
P10809_1064
20.4
P10809_1086
34.0
P10809_1113
38.3
Memory CD8 T-cell nTPM: 20.9
Samples: 5
Max nTPM: 40.0
Min nTPM: 13.6
P10809_1012
19.8
P10809_1027
16.9
P10809_1046
14.1
P10809_1065
13.6
P10809_1111
40.0
Naive CD4 T-cell nTPM: 26.9
Samples: 6
Max nTPM: 52.4
Min nTPM: 13.7
P10809_1015
52.4
P10809_1030
21.0
P10809_1049
13.7
P10809_1068
20.5
P10809_1085
33.9
P10809_1112
19.8
Naive CD8 T-cell nTPM: 26.5
Samples: 6
Max nTPM: 41.5
Min nTPM: 16.8
P10809_1016
31.9
P10809_1031
19.5
P10809_1050
18.3
P10809_1069
16.8
P10809_1087
41.5
P10809_1110
30.7
T-reg nTPM: 23.2
Samples: 6
Max nTPM: 39.5
Min nTPM: 9.3
P10809_1018
28.8
P10809_1037
25.8
P10809_1056
9.3
P10809_1075
17.3
P10809_1094
18.5
P10809_1106
39.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
34.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 26.2
Samples: 4
Max nTPM: 37.8
Min nTPM: 15.6
RHH5202_R3573
15.6
RHH5230_R3602
27.3
RHH5259_R3631
24.1
RHH5288_R3660
37.8
Effector memory CD8 T-cell nTPM: 10.8
Samples: 4
Max nTPM: 19.1
Min nTPM: 5.4
RHH5203_R3574
5.4
RHH5231_R3603
7.0
RHH5260_R3632
11.7
RHH5289_R3661
19.1
MAIT T-cell nTPM: 19.2
Samples: 4
Max nTPM: 40.7
Min nTPM: 3.4
RHH5233_R3605
7.9
RHH5205_R3576
24.9
RHH5262_R3634
40.7
RHH5297_R3663
3.4
Memory CD4 T-cell TFH nTPM: 12.6
Samples: 4
Max nTPM: 17.1
Min nTPM: 1.8
RHH5300_R3666
14.6
RHH5236_R3608
16.9
RHH5265_R3637
1.8
RHH5208_R3579
17.1
Memory CD4 T-cell Th1 nTPM: 34.2
Samples: 4
Max nTPM: 50.9
Min nTPM: 10.6
RHH5210_R3581
50.9
RHH5302_R3668
30.1
RHH5238_R3610
10.6
RHH5267_R3639
45.1
Memory CD4 T-cell Th1/Th17 nTPM: 16.6
Samples: 4
Max nTPM: 34.6
Min nTPM: 9.5
RHH5303_R3669
34.6
RHH5211_R3582
9.5
RHH5239_R3611
10.8
RHH5268_R3640
11.3
Memory CD4 T-cell Th17 nTPM: 15.0
Samples: 4
Max nTPM: 22.1
Min nTPM: 7.1
RHH5304_R3670
7.1
RHH5212_R3583
13.3
RHH5240_R3612
17.3
RHH5269_R3641
22.1
Memory CD4 T-cell Th2 nTPM: 24.4
Samples: 4
Max nTPM: 30.5
Min nTPM: 17.4
RHH5305_R3671
30.5
RHH5213_R3584
22.9
RHH5241_R3613
17.4
RHH5270_R3642
26.9
Naive CD4 T-cell nTPM: 29.2
Samples: 4
Max nTPM: 45.4
Min nTPM: 6.4
RHH5306_R3672
6.4
RHH5214_R3585
43.6
RHH5242_R3614
45.4
RHH5271_R3643
21.5
Naive CD8 T-cell nTPM: 17.3
Samples: 4
Max nTPM: 25.2
Min nTPM: 10.2
RHH5201_R3572
17.3
RHH5229_R3601
16.6
RHH5258_R3630
25.2
RHH5287_R3659
10.2
Non-Vd2 gdTCR nTPM: 17.6
Samples: 4
Max nTPM: 31.3
Min nTPM: 2.3
RHH5235_R3607
24.5
RHH5264_R3636
2.3
RHH5207_R3578
12.4
RHH5299_R3665
31.3
T-reg nTPM: 14.3
Samples: 4
Max nTPM: 25.5
Min nTPM: 2.5
RHH5301_R3667
19.3
RHH5237_R3609
2.5
RHH5266_R3638
10.0
RHH5209_R3580
25.5
Terminal effector memory CD4 T-cell nTPM: 20.5
Samples: 2
Max nTPM: 24.6
Min nTPM: 16.4
RHH5243_R3615
24.6
RHH5272_R3644
16.4
Terminal effector memory CD8 T-cell nTPM: 11.1
Samples: 4
Max nTPM: 16.5
Min nTPM: 6.0
RHH5232_R3604
11.7
RHH5204_R3575
10.0
RHH5261_R3633
16.5
RHH5296_R3662
6.0
Vd2 gdTCR nTPM: 26.4
Samples: 4
Max nTPM: 33.6
Min nTPM: 21.4
RHH5234_R3606
26.2
RHH5206_R3577
33.6
RHH5263_R3635
24.3
RHH5298_R3664
21.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
