HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:73.1 nTPM
HPA Brain:96.4 nTPM
GTEx:73.1 nTPM
FANTOM5:114.8 Scaled Tags Per Million
Pig:52.5 nTPM
Mouse:49.7 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042669
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 96.4
Sample id Sample description nTPM
Hippocampus
nTPM: 94.8
2148 Female, age 91, left hemisphere 101.6
1855 Male, age 76, left hemisphere 98.6
2529 Female, age 94, left hemisphere 96.9
2621 Female, age 67, right hemisphere 95.8
1898 Male, age 80, left hemisphere 87.9
1911 Female, age 85, right hemisphere 87.9
Dentate gyrus
nTPM: 96.4
2530 Female, age 94, left hemisphere 116.9
2528 Male, age 74, both hemispheres 98.4
2531 Female, age 67, both hemispheres 98.1
2010 Male, age 76, both hemispheres 92.7
2246 Female, age 85, both hemispheres 90.8
1927 Female, age 91, both hemispheres 81.3
Entorhinal gyrus
nTPM: 93.8
2613 Female, age 94, left hemisphere 104.8
2117 Female, age 91, right hemisphere 98.9
2764 Male, age 80, right hemisphere 98.1
2686 Male, age 75, right hemisphere 90.9
1787 Male, age 76, left hemisphere 89.7
1938 Female, age 85, left hemisphere 80.5
Hippocampus, CA1
nTPM: 90.8
2749 Male, age 80, left hemisphere 103.4
2082 Female, age 91, right hemisphere 97.8
2527 Male, age 74, both hemispheres 93.1
2045 Male, age 76, both hemispheres 82.8
1873 Female, age 85, both hemispheres 76.7
Hippocampus, CA2
nTPM: 93.3
2437 Female, age 94, left hemisphere 104.1
1963 Male, age 80, left hemisphere 98.8
2249 Male, age 74, both hemispheres 95.3
2113 Female, age 91, right hemisphere 89.8
1940 Female, age 85, left hemisphere 86.6
1892 Male, age 76, both hemispheres 85.2
Hippocampus, CA3
nTPM: 94.9
2620 Female, age 94, left hemisphere 104.5
2436 Male, age 74, both hemispheres 103.3
2137 Male, age 80, left hemisphere 98.9
2861 Female, age 67, both hemispheres 95.4
1867 Male, age 76, both hemispheres 85.3
1891 Female, age 85, both hemispheres 82.3
Parahippocampal cortex
nTPM: 85.9
2622 Female, age 67, right hemisphere 93.2
2532 Female, age 72, left hemisphere 91.6
1990 Female, age 91, right hemisphere 90.5
2245 Female, age 91, both hemispheres 90.2
2693 Female, age 94, both hemispheres 89.8
2692 Male, age 74, both hemispheres 88.4
2250 Female, age 67, right hemisphere 83.5
2018 Male, age 76, both hemispheres 78.9
1850 Male, age 80, both hemispheres 77.8
1933 Female, age 85, both hemispheres 74.8
Perirhinal gyrus
nTPM: 84.1
2521 Female, age 94, right hemisphere 100.9
1794 Male, age 80, right hemisphere 90.6
2848 Male, age 76, right hemisphere 80.8
1847 Female, age 91, left hemisphere 79.9
1841 Female, age 85, right hemisphere 68.3
Subiculum
nTPM: 93.0
2042 Male, age 76, both hemispheres 99.0
2729 Female, age 91, right hemisphere 98.2
2619 Male, age 74, both hemispheres 95.2
1977 Female, age 85, both hemispheres 89.7
1901 Male, age 80, both hemispheres 88.8
2438 Female, age 94, left hemisphere 87.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 73.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 73.1
Samples: 197

Max nTPM: 128.0
Min nTPM: 33.5
Std nTPM: 16.8
Median nTPM: 72.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 128.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 120.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 119.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 118.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 118.0
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 115.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 105.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 103.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 103.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 102.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 100.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 114.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 114.8
FF:10153-102I9 76 years, female 124.7
FF:10169-103B7 60 years, female 104.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.5
Pig sample Sample description nTPM
Subiculum
nTPM: 49.2
Samples: 4

Max nTPM: 61.3
Min nTPM: 43.3
Sample A Female 61.3
Sample B Female 43.7
Sample C Male 48.5
Sample D Male 43.3
Dorsal hippocampus
nTPM: 52.5
Samples: 4

Max nTPM: 65.5
Min nTPM: 39.3
Sample A Female 65.5
Sample B Female 55.4
Sample C Male 49.8
Sample D Male 39.3
Entorhinal cortex
nTPM: 46.5
Samples: 4

Max nTPM: 53.7
Min nTPM: 40.3
Sample A Female 50.8
Sample B Female 41.1
Sample C Male 53.7
Sample D Male 40.3
Ventral hippocampus
nTPM: 51.4
Samples: 4

Max nTPM: 63.1
Min nTPM: 36.1
Sample A Female 52.9
Sample B Female 36.1
Sample C Male 63.1
Sample D Male 53.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 49.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.9
Samples: 4

Max nTPM: 49.3
Min nTPM: 45.1
Sample A Male 45.1
Sample B Male 49.3
Sample C Female 45.8
Sample D Female 47.2
Hippocampal formation
nTPM: 49.7
Samples: 4

Max nTPM: 55.2
Min nTPM: 44.6
Sample A Male 44.6
Sample B Male 49.1
Sample C Female 49.9
Sample D Female 55.2

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