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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
37.9
nTPM
GTEx:
37.9
nTPM
FANTOM5:
155.4
Scaled Tags Per Million
Pig:
35.3
nTPM
Mouse:
46.8
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
37.9
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 37.9
Samples: 105
Max nTPM: 95.4
Min nTPM: 5.6
Std nTPM: 18.2
Median nTPM: 0.0
218_1
71 years, female
95.4
352_1
62 years, male
76.4
356_1
87 years, female
74.5
322_1
76 years, male
71.8
354_1
81 years, female
71.7
320_1
89 years, female
69.8
319_1
81 years, male
68.4
163_1
78 years, male
64.4
353_1
82 years, female
61.2
295_1
61 years, female
60.8
335_1
73 years, female
60.4
452_1
88 years, female
60.2
350_1
84 years, female
59.9
394_1
75 years, female
58.7
318_1
68 years, male
58.5
292_1
71 years, male
57.4
377_1
82 years, female
56.8
321_1
62 years, female
55.8
386_1
76 years, male
55.2
349_1
83 years, male
55.0
376_1
75 years, female
54.7
243_1
75 years, male
54.6
355_1
70 years, female
54.6
406_1
79 years, male
54.6
351_1
91 years, male
53.8
293_1
68 years, female
53.4
286_1
68 years, female
53.2
251_1
78 years, male
49.7
172_1
72 years, female
49.2
404_1
82 years, female
49.2
447_1
81 years, male
48.6
237_1
82 years, male
47.4
316_1
62 years, male
47.2
317_1
60 years, male
47.2
405_1
91 years, male
47.1
375_1
74 years, female
46.6
506_1
65 years, male
46.4
425_1
59 years, female
46.1
503_1
68 years, male
45.6
291_1
76 years, male
45.3
348_1
84 years, male
44.4
379_1
60 years, male
44.0
264_1
73 years, female
41.9
480_1
63 years, male
41.8
41_1
94 years, female
41.3
177_1
74 years, male
40.7
229_1
69 years, female
40.6
189_1
76 years, male
40.5
389_1
86 years, female
40.1
384_1
83 years, male
38.1
266_1
85 years, male
36.8
173_1
67 years, male
36.4
246_1
77 years, male
36.2
4_1
88 years, female
36.1
99_1
64 years, male
36.1
153_1
70 years, female
35.5
396_1
62 years, male
35.4
347_1
72 years, male
35.3
517_1
88 years, male
35.2
311_1
78 years, male
34.4
35_1
74 years, female
32.8
6_1
73 years, female
31.3
254_1
77 years, female
30.7
265_1
87 years, male
29.8
468_1
89 years, male
29.0
2_1
77 years, female
28.6
137_1
83 years, male
28.1
518_1
75 years, female
28.1
217_1
76 years, male
27.7
288_1
66 years, female
27.6
314_1
67 years, male
27.3
526_1
61 years, male
27.3
313_1
79 years, female
27.1
81_1
67 years, male
26.6
17_1
71 years, male
24.4
120_1
70 years, female
23.8
115_1
83 years, male
23.7
324_1
76 years, male
23.6
18_1
88 years, male
23.2
307_1
66 years, female
21.8
145_1
84 years, male
21.7
315_1
62 years, female
21.7
499_1
55 years, female
20.7
126_1
63 years, male
20.5
109_1
81 years, female
20.1
32_1
67 years, male
19.8
308_1
70 years, female
19.3
162_1
79 years, female
19.2
142_1
61 years, female
17.1
42_1
85 years, male
16.9
495_1
57 years, female
16.5
139_1
64 years, female
16.4
415_1
77 years, female
16.2
9_1
66 years, female
15.9
414_1
84 years, female
14.4
117_1
61 years, male
14.1
43_1
64 years, female
14.0
466_1
57 years, female
13.9
501_1
88 years, male
13.2
89_1
63 years, male
10.7
119_1
70 years, female
10.4
413_1
59 years, female
9.7
149_1
88 years, male
9.0
490_1
67 years, female
5.7
491_1
89 years, female
5.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.