HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:81.0 nTPM
HPA Brain:43.7 nTPM
GTEx:81.0 nTPM
FANTOM5:96.9 Scaled Tags Per Million
Pig:26.0 nTPM
Mouse:62.5 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059198
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.7
Sample id Sample description nTPM
Hippocampus
nTPM: 42.2
1898 Male, age 80, left hemisphere 50.8
1855 Male, age 76, left hemisphere 49.1
2621 Female, age 67, right hemisphere 43.6
2529 Female, age 94, left hemisphere 40.6
2148 Female, age 91, left hemisphere 34.9
1911 Female, age 85, right hemisphere 34.3
Dentate gyrus
nTPM: 39.8
2010 Male, age 76, both hemispheres 47.6
1927 Female, age 91, both hemispheres 42.8
2530 Female, age 94, left hemisphere 42.0
2246 Female, age 85, both hemispheres 39.3
2528 Male, age 74, both hemispheres 35.1
2531 Female, age 67, both hemispheres 31.8
Entorhinal gyrus
nTPM: 36.6
1787 Male, age 76, left hemisphere 44.3
1938 Female, age 85, left hemisphere 41.9
2764 Male, age 80, right hemisphere 37.5
2117 Female, age 91, right hemisphere 37.3
2686 Male, age 75, right hemisphere 29.6
2613 Female, age 94, left hemisphere 29.1
Hippocampus, CA1
nTPM: 43.7
2749 Male, age 80, left hemisphere 58.2
2045 Male, age 76, both hemispheres 44.6
2527 Male, age 74, both hemispheres 43.5
1873 Female, age 85, both hemispheres 42.3
2082 Female, age 91, right hemisphere 30.0
Hippocampus, CA2
nTPM: 42.2
1892 Male, age 76, both hemispheres 49.4
2249 Male, age 74, both hemispheres 47.9
1963 Male, age 80, left hemisphere 44.4
2437 Female, age 94, left hemisphere 42.9
2113 Female, age 91, right hemisphere 35.0
1940 Female, age 85, left hemisphere 33.6
Hippocampus, CA3
nTPM: 41.0
1867 Male, age 76, both hemispheres 48.5
2137 Male, age 80, left hemisphere 45.4
2436 Male, age 74, both hemispheres 44.9
1891 Female, age 85, both hemispheres 40.6
2620 Female, age 94, left hemisphere 38.4
2861 Female, age 67, both hemispheres 28.1
Parahippocampal cortex
nTPM: 38.6
2250 Female, age 67, right hemisphere 49.7
2018 Male, age 76, both hemispheres 47.9
1850 Male, age 80, both hemispheres 41.4
2245 Female, age 91, both hemispheres 40.0
1933 Female, age 85, both hemispheres 38.7
1990 Female, age 91, right hemisphere 37.3
2532 Female, age 72, left hemisphere 36.9
2693 Female, age 94, both hemispheres 35.2
2692 Male, age 74, both hemispheres 30.0
2622 Female, age 67, right hemisphere 28.7
Perirhinal gyrus
nTPM: 41.8
1847 Female, age 91, left hemisphere 45.5
1794 Male, age 80, right hemisphere 42.2
2521 Female, age 94, right hemisphere 41.8
1841 Female, age 85, right hemisphere 40.9
2848 Male, age 76, right hemisphere 38.6
Subiculum
nTPM: 42.9
2042 Male, age 76, both hemispheres 49.9
2438 Female, age 94, left hemisphere 48.7
2619 Male, age 74, both hemispheres 43.8
1901 Male, age 80, both hemispheres 40.8
1977 Female, age 85, both hemispheres 40.3
2729 Female, age 91, right hemisphere 33.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 81.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 81.0
Samples: 197

Max nTPM: 177.9
Min nTPM: 45.1
Std nTPM: 22.4
Median nTPM: 76.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 177.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 162.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 161.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 159.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 150.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 139.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 139.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 137.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 136.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 130.4
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 128.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 96.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 96.9
FF:10169-103B7 60 years, female 120.4
FF:10153-102I9 76 years, female 73.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.0
Pig sample Sample description nTPM
Subiculum
nTPM: 23.2
Samples: 4

Max nTPM: 27.8
Min nTPM: 20.0
Sample A Female 27.8
Sample B Female 23.4
Sample C Male 20.0
Sample D Male 21.7
Dorsal hippocampus
nTPM: 26.0
Samples: 4

Max nTPM: 33.0
Min nTPM: 22.4
Sample A Female 33.0
Sample B Female 24.5
Sample C Male 22.4
Sample D Male 24.2
Entorhinal cortex
nTPM: 23.6
Samples: 4

Max nTPM: 26.6
Min nTPM: 20.3
Sample A Female 26.6
Sample B Female 26.0
Sample C Male 21.3
Sample D Male 20.3
Ventral hippocampus
nTPM: 23.6
Samples: 4

Max nTPM: 26.1
Min nTPM: 20.8
Sample A Female 26.1
Sample B Female 20.8
Sample C Male 24.0
Sample D Male 23.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 62.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.1
Samples: 4

Max nTPM: 67.9
Min nTPM: 49.4
Sample A Male 49.4
Sample B Male 64.5
Sample C Female 67.9
Sample D Female 54.7
Hippocampal formation
nTPM: 62.5
Samples: 4

Max nTPM: 71.3
Min nTPM: 57.2
Sample A Male 71.3
Sample B Male 59.2
Sample C Female 62.3
Sample D Female 57.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
75042268 Antisense, RP_060412_02_D10, Mouse strain C57BL/6J (56 days, male) 0.4
69549190 Antisense, RP_050120_01_B12, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org