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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
245.7
nTPM
Monaco:
243.0
nTPM
Schmiedel:
144.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
245.7
HPA sample
nTPM
gdT-cell nTPM: 159.1
Samples: 6
Max nTPM: 194.4
Min nTPM: 105.5
P10809_1007
105.5
P10809_1022
194.4
P10809_1041
175.9
P10809_1060
138.4
P10809_1077
171.7
P10809_1098
168.9
MAIT T-cell nTPM: 173.0
Samples: 6
Max nTPM: 243.4
Min nTPM: 130.5
P10809_1006
141.3
P10809_1024
243.4
P10809_1043
165.9
P10809_1062
178.4
P10809_1083
130.5
P10809_1097
178.2
Memory CD4 T-cell nTPM: 151.1
Samples: 6
Max nTPM: 188.0
Min nTPM: 123.4
P10809_1014
123.4
P10809_1026
188.0
P10809_1045
158.3
P10809_1064
151.8
P10809_1086
141.1
P10809_1113
144.0
Memory CD8 T-cell nTPM: 167.0
Samples: 5
Max nTPM: 176.6
Min nTPM: 159.0
P10809_1012
159.0
P10809_1027
173.2
P10809_1046
176.6
P10809_1065
160.0
P10809_1111
166.3
Naive CD4 T-cell nTPM: 160.1
Samples: 6
Max nTPM: 198.3
Min nTPM: 111.8
P10809_1015
111.8
P10809_1030
172.4
P10809_1049
198.3
P10809_1068
162.2
P10809_1085
168.4
P10809_1112
147.7
Naive CD8 T-cell nTPM: 150.6
Samples: 6
Max nTPM: 184.7
Min nTPM: 113.4
P10809_1016
113.4
P10809_1031
151.1
P10809_1050
150.5
P10809_1069
184.7
P10809_1087
155.4
P10809_1110
148.5
T-reg nTPM: 245.7
Samples: 6
Max nTPM: 358.4
Min nTPM: 169.0
P10809_1018
169.0
P10809_1037
237.9
P10809_1056
358.4
P10809_1075
244.6
P10809_1094
260.7
P10809_1106
203.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
243.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 167.3
Samples: 4
Max nTPM: 200.0
Min nTPM: 145.1
RHH5202_R3573
147.9
RHH5230_R3602
145.1
RHH5259_R3631
200.0
RHH5288_R3660
176.2
Effector memory CD8 T-cell nTPM: 241.6
Samples: 4
Max nTPM: 260.6
Min nTPM: 224.4
RHH5203_R3574
260.6
RHH5231_R3603
225.5
RHH5260_R3632
224.4
RHH5289_R3661
256.0
MAIT T-cell nTPM: 203.8
Samples: 4
Max nTPM: 211.6
Min nTPM: 194.6
RHH5233_R3605
202.3
RHH5205_R3576
206.5
RHH5262_R3634
211.6
RHH5297_R3663
194.6
Memory CD4 T-cell TFH nTPM: 198.8
Samples: 4
Max nTPM: 215.2
Min nTPM: 183.4
RHH5300_R3666
196.2
RHH5236_R3608
215.2
RHH5265_R3637
183.4
RHH5208_R3579
200.5
Memory CD4 T-cell Th1 nTPM: 181.5
Samples: 4
Max nTPM: 225.0
Min nTPM: 152.5
RHH5210_R3581
188.0
RHH5302_R3668
160.3
RHH5238_R3610
152.5
RHH5267_R3639
225.0
Memory CD4 T-cell Th1/Th17 nTPM: 193.4
Samples: 4
Max nTPM: 196.6
Min nTPM: 186.9
RHH5303_R3669
186.9
RHH5211_R3582
193.4
RHH5239_R3611
196.6
RHH5268_R3640
196.5
Memory CD4 T-cell Th17 nTPM: 206.6
Samples: 4
Max nTPM: 267.0
Min nTPM: 173.5
RHH5304_R3670
173.5
RHH5212_R3583
174.3
RHH5240_R3612
211.7
RHH5269_R3641
267.0
Memory CD4 T-cell Th2 nTPM: 198.9
Samples: 4
Max nTPM: 215.5
Min nTPM: 187.4
RHH5305_R3671
196.3
RHH5213_R3584
215.5
RHH5241_R3613
187.4
RHH5270_R3642
196.2
Naive CD4 T-cell nTPM: 198.1
Samples: 4
Max nTPM: 234.9
Min nTPM: 161.6
RHH5306_R3672
211.9
RHH5214_R3585
161.6
RHH5242_R3614
183.9
RHH5271_R3643
234.9
Naive CD8 T-cell nTPM: 162.1
Samples: 4
Max nTPM: 197.3
Min nTPM: 136.2
RHH5201_R3572
136.2
RHH5229_R3601
147.5
RHH5258_R3630
167.2
RHH5287_R3659
197.3
Non-Vd2 gdTCR nTPM: 222.2
Samples: 4
Max nTPM: 285.0
Min nTPM: 146.9
RHH5235_R3607
285.0
RHH5264_R3636
192.2
RHH5207_R3578
264.8
RHH5299_R3665
146.9
T-reg nTPM: 220.3
Samples: 4
Max nTPM: 242.3
Min nTPM: 202.7
RHH5301_R3667
222.4
RHH5237_R3609
242.3
RHH5266_R3638
213.7
RHH5209_R3580
202.7
Terminal effector memory CD4 T-cell nTPM: 228.3
Samples: 2
Max nTPM: 263.4
Min nTPM: 193.1
RHH5243_R3615
263.4
RHH5272_R3644
193.1
Terminal effector memory CD8 T-cell nTPM: 243.0
Samples: 4
Max nTPM: 288.4
Min nTPM: 186.0
RHH5232_R3604
260.2
RHH5204_R3575
186.0
RHH5261_R3633
288.4
RHH5296_R3662
237.5
Vd2 gdTCR nTPM: 200.3
Samples: 4
Max nTPM: 260.2
Min nTPM: 172.7
RHH5234_R3606
189.7
RHH5206_R3577
172.7
RHH5263_R3635
260.2
RHH5298_R3664
178.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.