HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:165.9 nTPM
HPA Brain:212.3 nTPM
GTEx:165.9 nTPM
FANTOM5:32.4 Scaled Tags Per Million
Pig:25.0 nTPM
Mouse:119.2 nTPM
Allen mouse:1.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024550Antibody HPA027160
Glial cells MediumMedium
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 212.3
Sample id Sample description nTPM
Hippocampus
nTPM: 212.1
2529 Female, age 94, left hemisphere 244.1
2148 Female, age 91, left hemisphere 221.8
1898 Male, age 80, left hemisphere 216.4
2621 Female, age 67, right hemisphere 207.6
1911 Female, age 85, right hemisphere 201.8
1855 Male, age 76, left hemisphere 180.7
Dentate gyrus
nTPM: 198.8
2531 Female, age 67, both hemispheres 260.2
1927 Female, age 91, both hemispheres 210.0
2528 Male, age 74, both hemispheres 193.1
2530 Female, age 94, left hemisphere 190.5
2010 Male, age 76, both hemispheres 180.6
2246 Female, age 85, both hemispheres 158.2
Entorhinal gyrus
nTPM: 212.3
2764 Male, age 80, right hemisphere 236.7
2686 Male, age 75, right hemisphere 232.6
2613 Female, age 94, left hemisphere 227.0
1787 Male, age 76, left hemisphere 203.1
2117 Female, age 91, right hemisphere 193.8
1938 Female, age 85, left hemisphere 180.7
Hippocampus, CA1
nTPM: 206.9
2749 Male, age 80, left hemisphere 250.7
2527 Male, age 74, both hemispheres 222.2
2082 Female, age 91, right hemisphere 206.9
2045 Male, age 76, both hemispheres 186.9
1873 Female, age 85, both hemispheres 168.0
Hippocampus, CA2
nTPM: 189.9
2113 Female, age 91, right hemisphere 215.2
1963 Male, age 80, left hemisphere 204.4
2249 Male, age 74, both hemispheres 201.3
1892 Male, age 76, both hemispheres 186.5
2437 Female, age 94, left hemisphere 167.2
1940 Female, age 85, left hemisphere 164.6
Hippocampus, CA3
nTPM: 210.0
2861 Female, age 67, both hemispheres 283.2
2137 Male, age 80, left hemisphere 229.4
2620 Female, age 94, left hemisphere 204.4
1867 Male, age 76, both hemispheres 201.2
2436 Male, age 74, both hemispheres 184.4
1891 Female, age 85, both hemispheres 157.7
Parahippocampal cortex
nTPM: 202.3
2622 Female, age 67, right hemisphere 237.7
2018 Male, age 76, both hemispheres 224.3
2250 Female, age 67, right hemisphere 219.5
2245 Female, age 91, both hemispheres 217.8
1933 Female, age 85, both hemispheres 199.8
1990 Female, age 91, right hemisphere 195.1
2692 Male, age 74, both hemispheres 192.7
2532 Female, age 72, left hemisphere 189.8
2693 Female, age 94, both hemispheres 173.5
1850 Male, age 80, both hemispheres 172.5
Perirhinal gyrus
nTPM: 190.7
1794 Male, age 80, right hemisphere 209.7
2521 Female, age 94, right hemisphere 201.7
1847 Female, age 91, left hemisphere 198.2
2848 Male, age 76, right hemisphere 172.7
1841 Female, age 85, right hemisphere 171.2
Subiculum
nTPM: 178.0
2619 Male, age 74, both hemispheres 197.2
1977 Female, age 85, both hemispheres 195.3
1901 Male, age 80, both hemispheres 191.4
2729 Female, age 91, right hemisphere 190.3
2042 Male, age 76, both hemispheres 170.6
2438 Female, age 94, left hemisphere 123.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 165.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 165.9
Samples: 197

Max nTPM: 387.8
Min nTPM: 34.6
Std nTPM: 62.8
Median nTPM: 157.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 387.8
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 355.8
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 327.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 322.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 313.8
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 312.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 306.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 302.5
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 296.9
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 290.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 284.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.4
FF:10169-103B7 60 years, female 33.2
FF:10153-102I9 76 years, female 31.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.0
Pig sample Sample description nTPM
Subiculum
nTPM: 22.1
Samples: 4

Max nTPM: 23.0
Min nTPM: 21.2
Sample A Female 22.7
Sample B Female 23.0
Sample C Male 21.3
Sample D Male 21.2
Dorsal hippocampus
nTPM: 25.0
Samples: 4

Max nTPM: 27.7
Min nTPM: 21.9
Sample A Female 27.7
Sample B Female 23.0
Sample C Male 27.2
Sample D Male 21.9
Entorhinal cortex
nTPM: 22.7
Samples: 4

Max nTPM: 24.3
Min nTPM: 20.9
Sample A Female 22.5
Sample B Female 23.1
Sample C Male 24.3
Sample D Male 20.9
Ventral hippocampus
nTPM: 24.9
Samples: 4

Max nTPM: 27.1
Min nTPM: 22.9
Sample A Female 26.2
Sample B Female 22.9
Sample C Male 27.1
Sample D Male 23.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 119.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 118.6
Samples: 4

Max nTPM: 134.3
Min nTPM: 96.8
Sample A Male 117.0
Sample B Male 126.4
Sample C Female 134.3
Sample D Female 96.8
Hippocampal formation
nTPM: 119.2
Samples: 4

Max nTPM: 142.6
Min nTPM: 103.9
Sample A Male 142.6
Sample B Male 111.7
Sample C Female 103.9
Sample D Female 118.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.2
68546311 Antisense, RP_050120_02_C12, Mouse strain C57BL/6J (56 days, male) 2.4
74300849 Antisense, RP_051219_03_H07, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org