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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
333.3
nTPM
Monaco:
18.8
nTPM
Schmiedel:
94.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
333.3
HPA sample
nTPM
gdT-cell nTPM: 226.2
Samples: 6
Max nTPM: 367.0
Min nTPM: 116.1
P10809_1007
124.5
P10809_1022
238.4
P10809_1041
367.0
P10809_1060
116.1
P10809_1077
249.2
P10809_1098
262.1
MAIT T-cell nTPM: 212.1
Samples: 6
Max nTPM: 324.2
Min nTPM: 92.9
P10809_1006
92.9
P10809_1024
170.9
P10809_1043
324.2
P10809_1062
195.1
P10809_1083
186.9
P10809_1097
302.6
Memory CD4 T-cell nTPM: 235.8
Samples: 6
Max nTPM: 289.4
Min nTPM: 112.8
P10809_1014
112.8
P10809_1026
289.4
P10809_1045
276.5
P10809_1064
282.1
P10809_1086
244.6
P10809_1113
209.1
Memory CD8 T-cell nTPM: 257.1
Samples: 5
Max nTPM: 350.3
Min nTPM: 122.4
P10809_1012
122.4
P10809_1027
249.8
P10809_1046
350.3
P10809_1065
267.1
P10809_1111
296.0
Naive CD4 T-cell nTPM: 221.9
Samples: 6
Max nTPM: 371.8
Min nTPM: 75.8
P10809_1015
75.8
P10809_1030
186.7
P10809_1049
371.8
P10809_1068
200.0
P10809_1085
240.5
P10809_1112
256.4
Naive CD8 T-cell nTPM: 206.8
Samples: 6
Max nTPM: 287.5
Min nTPM: 96.6
P10809_1016
96.6
P10809_1031
210.3
P10809_1050
235.3
P10809_1069
287.5
P10809_1087
191.6
P10809_1110
219.5
T-reg nTPM: 333.3
Samples: 6
Max nTPM: 516.5
Min nTPM: 164.6
P10809_1018
164.6
P10809_1037
310.9
P10809_1056
516.5
P10809_1075
337.3
P10809_1094
300.6
P10809_1106
369.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
18.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 11.5
Samples: 4
Max nTPM: 20.2
Min nTPM: 2.1
RHH5202_R3573
2.1
RHH5230_R3602
16.8
RHH5259_R3631
20.2
RHH5288_R3660
6.8
Effector memory CD8 T-cell nTPM: 9.2
Samples: 4
Max nTPM: 12.3
Min nTPM: 5.2
RHH5203_R3574
10.2
RHH5231_R3603
9.2
RHH5260_R3632
12.3
RHH5289_R3661
5.2
MAIT T-cell nTPM: 8.3
Samples: 4
Max nTPM: 13.1
Min nTPM: 4.6
RHH5233_R3605
4.6
RHH5205_R3576
9.0
RHH5262_R3634
13.1
RHH5297_R3663
6.4
Memory CD4 T-cell TFH nTPM: 9.5
Samples: 4
Max nTPM: 19.0
Min nTPM: 2.3
RHH5300_R3666
10.9
RHH5236_R3608
19.0
RHH5265_R3637
5.7
RHH5208_R3579
2.3
Memory CD4 T-cell Th1 nTPM: 13.5
Samples: 4
Max nTPM: 26.3
Min nTPM: 1.4
RHH5210_R3581
1.4
RHH5302_R3668
10.4
RHH5238_R3610
26.3
RHH5267_R3639
15.7
Memory CD4 T-cell Th1/Th17 nTPM: 10.7
Samples: 4
Max nTPM: 19.0
Min nTPM: 3.6
RHH5303_R3669
3.6
RHH5211_R3582
6.0
RHH5239_R3611
14.0
RHH5268_R3640
19.0
Memory CD4 T-cell Th17 nTPM: 13.3
Samples: 4
Max nTPM: 16.2
Min nTPM: 9.5
RHH5304_R3670
12.8
RHH5212_R3583
9.5
RHH5240_R3612
14.5
RHH5269_R3641
16.2
Memory CD4 T-cell Th2 nTPM: 12.6
Samples: 4
Max nTPM: 21.1
Min nTPM: 6.0
RHH5305_R3671
21.1
RHH5213_R3584
6.0
RHH5241_R3613
9.7
RHH5270_R3642
13.7
Naive CD4 T-cell nTPM: 11.5
Samples: 4
Max nTPM: 15.4
Min nTPM: 6.1
RHH5306_R3672
13.4
RHH5214_R3585
15.4
RHH5242_R3614
6.1
RHH5271_R3643
10.9
Naive CD8 T-cell nTPM: 9.9
Samples: 4
Max nTPM: 13.1
Min nTPM: 3.3
RHH5201_R3572
3.3
RHH5229_R3601
13.1
RHH5258_R3630
11.0
RHH5287_R3659
12.1
Non-Vd2 gdTCR nTPM: 7.1
Samples: 4
Max nTPM: 12.3
Min nTPM: 2.6
RHH5235_R3607
10.1
RHH5264_R3636
3.4
RHH5207_R3578
2.6
RHH5299_R3665
12.3
T-reg nTPM: 12.4
Samples: 4
Max nTPM: 17.0
Min nTPM: 8.5
RHH5301_R3667
13.3
RHH5237_R3609
8.5
RHH5266_R3638
17.0
RHH5209_R3580
10.9
Terminal effector memory CD4 T-cell nTPM: 12.3
Samples: 2
Max nTPM: 22.3
Min nTPM: 2.2
RHH5243_R3615
22.3
RHH5272_R3644
2.2
Terminal effector memory CD8 T-cell nTPM: 14.0
Samples: 4
Max nTPM: 25.6
Min nTPM: 2.5
RHH5232_R3604
2.5
RHH5204_R3575
25.6
RHH5261_R3633
23.1
RHH5296_R3662
4.6
Vd2 gdTCR nTPM: 18.8
Samples: 4
Max nTPM: 38.0
Min nTPM: 6.3
RHH5234_R3606
6.3
RHH5206_R3577
38.0
RHH5263_R3635
16.2
RHH5298_R3664
14.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
