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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
16.4
nTPM
Monaco:
157.3
nTPM
Schmiedel:
303.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
16.4
HPA sample
nTPM
gdT-cell nTPM: 16.4
Samples: 6
Max nTPM: 21.6
Min nTPM: 11.5
P10809_1007
11.8
P10809_1022
21.0
P10809_1041
20.6
P10809_1060
21.6
P10809_1077
12.0
P10809_1098
11.5
MAIT T-cell nTPM: 14.3
Samples: 6
Max nTPM: 19.2
Min nTPM: 7.0
P10809_1006
19.2
P10809_1024
18.5
P10809_1043
18.9
P10809_1062
10.3
P10809_1083
11.7
P10809_1097
7.0
Memory CD4 T-cell nTPM: 15.1
Samples: 6
Max nTPM: 20.6
Min nTPM: 11.7
P10809_1014
17.5
P10809_1026
20.6
P10809_1045
13.3
P10809_1064
11.7
P10809_1086
12.4
P10809_1113
14.8
Memory CD8 T-cell nTPM: 14.5
Samples: 5
Max nTPM: 24.9
Min nTPM: 8.6
P10809_1012
24.9
P10809_1027
8.6
P10809_1046
13.4
P10809_1065
12.2
P10809_1111
13.4
Naive CD4 T-cell nTPM: 13.5
Samples: 6
Max nTPM: 19.9
Min nTPM: 10.3
P10809_1015
12.6
P10809_1030
19.9
P10809_1049
13.0
P10809_1068
10.3
P10809_1085
12.6
P10809_1112
12.4
Naive CD8 T-cell nTPM: 12.4
Samples: 6
Max nTPM: 15.5
Min nTPM: 10.1
P10809_1016
14.3
P10809_1031
15.5
P10809_1050
12.5
P10809_1069
10.7
P10809_1087
10.1
P10809_1110
11.4
T-reg nTPM: 16.0
Samples: 6
Max nTPM: 25.4
Min nTPM: 6.8
P10809_1018
25.4
P10809_1037
20.3
P10809_1056
13.3
P10809_1075
6.8
P10809_1094
11.9
P10809_1106
18.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
157.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 145.4
Samples: 4
Max nTPM: 163.0
Min nTPM: 127.9
RHH5202_R3573
163.0
RHH5230_R3602
127.9
RHH5259_R3631
158.0
RHH5288_R3660
132.7
Effector memory CD8 T-cell nTPM: 125.3
Samples: 4
Max nTPM: 137.4
Min nTPM: 114.6
RHH5203_R3574
123.3
RHH5231_R3603
125.7
RHH5260_R3632
137.4
RHH5289_R3661
114.6
MAIT T-cell nTPM: 115.5
Samples: 4
Max nTPM: 129.5
Min nTPM: 99.5
RHH5233_R3605
111.1
RHH5205_R3576
129.5
RHH5262_R3634
99.5
RHH5297_R3663
121.9
Memory CD4 T-cell TFH nTPM: 134.2
Samples: 4
Max nTPM: 141.1
Min nTPM: 120.1
RHH5300_R3666
140.9
RHH5236_R3608
141.1
RHH5265_R3637
134.5
RHH5208_R3579
120.1
Memory CD4 T-cell Th1 nTPM: 137.6
Samples: 4
Max nTPM: 140.1
Min nTPM: 136.2
RHH5210_R3581
137.4
RHH5302_R3668
140.1
RHH5238_R3610
136.5
RHH5267_R3639
136.2
Memory CD4 T-cell Th1/Th17 nTPM: 144.5
Samples: 4
Max nTPM: 168.1
Min nTPM: 120.8
RHH5303_R3669
168.1
RHH5211_R3582
140.1
RHH5239_R3611
149.0
RHH5268_R3640
120.8
Memory CD4 T-cell Th17 nTPM: 127.1
Samples: 4
Max nTPM: 141.7
Min nTPM: 110.9
RHH5304_R3670
140.6
RHH5212_R3583
110.9
RHH5240_R3612
141.7
RHH5269_R3641
115.0
Memory CD4 T-cell Th2 nTPM: 131.0
Samples: 4
Max nTPM: 143.7
Min nTPM: 105.6
RHH5305_R3671
143.7
RHH5213_R3584
137.9
RHH5241_R3613
105.6
RHH5270_R3642
136.7
Naive CD4 T-cell nTPM: 157.3
Samples: 4
Max nTPM: 175.6
Min nTPM: 133.4
RHH5306_R3672
175.6
RHH5214_R3585
167.7
RHH5242_R3614
152.3
RHH5271_R3643
133.4
Naive CD8 T-cell nTPM: 155.2
Samples: 4
Max nTPM: 187.7
Min nTPM: 136.0
RHH5201_R3572
136.0
RHH5229_R3601
187.7
RHH5258_R3630
141.0
RHH5287_R3659
156.1
Non-Vd2 gdTCR nTPM: 132.6
Samples: 4
Max nTPM: 150.4
Min nTPM: 119.8
RHH5235_R3607
150.4
RHH5264_R3636
127.6
RHH5207_R3578
119.8
RHH5299_R3665
132.7
T-reg nTPM: 116.8
Samples: 4
Max nTPM: 128.7
Min nTPM: 105.5
RHH5301_R3667
124.0
RHH5237_R3609
128.7
RHH5266_R3638
105.5
RHH5209_R3580
109.1
Terminal effector memory CD4 T-cell nTPM: 128.1
Samples: 2
Max nTPM: 130.6
Min nTPM: 125.6
RHH5243_R3615
125.6
RHH5272_R3644
130.6
Terminal effector memory CD8 T-cell nTPM: 127.7
Samples: 4
Max nTPM: 143.7
Min nTPM: 106.4
RHH5232_R3604
126.1
RHH5204_R3575
106.4
RHH5261_R3633
143.7
RHH5296_R3662
134.7
Vd2 gdTCR nTPM: 123.6
Samples: 4
Max nTPM: 137.7
Min nTPM: 104.5
RHH5234_R3606
127.3
RHH5206_R3577
104.5
RHH5263_R3635
137.7
RHH5298_R3664
124.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
