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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
14.3
nTPM
Monaco:
27.2
nTPM
Schmiedel:
47.8
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
14.3
HPA sample
nTPM
gdT-cell nTPM: 12.3
Samples: 6
Max nTPM: 18.1
Min nTPM: 5.5
P10809_1007
18.1
P10809_1022
9.0
P10809_1041
11.3
P10809_1060
5.5
P10809_1077
16.7
P10809_1098
13.3
MAIT T-cell nTPM: 10.2
Samples: 6
Max nTPM: 17.3
Min nTPM: 4.1
P10809_1006
10.0
P10809_1024
4.1
P10809_1043
14.3
P10809_1062
5.8
P10809_1083
9.7
P10809_1097
17.3
Memory CD4 T-cell nTPM: 12.0
Samples: 6
Max nTPM: 15.3
Min nTPM: 5.6
P10809_1014
13.4
P10809_1026
13.2
P10809_1045
14.6
P10809_1064
15.3
P10809_1086
9.7
P10809_1113
5.6
Memory CD8 T-cell nTPM: 11.0
Samples: 5
Max nTPM: 17.6
Min nTPM: 3.3
P10809_1012
9.7
P10809_1027
3.3
P10809_1046
17.6
P10809_1065
11.9
P10809_1111
12.6
Naive CD4 T-cell nTPM: 9.6
Samples: 6
Max nTPM: 14.3
Min nTPM: 7.9
P10809_1015
8.3
P10809_1030
7.9
P10809_1049
10.6
P10809_1068
8.4
P10809_1085
14.3
P10809_1112
8.0
Naive CD8 T-cell nTPM: 9.1
Samples: 6
Max nTPM: 14.6
Min nTPM: 5.3
P10809_1016
8.8
P10809_1031
7.6
P10809_1050
10.2
P10809_1069
14.6
P10809_1087
5.3
P10809_1110
7.9
T-reg nTPM: 14.3
Samples: 6
Max nTPM: 28.0
Min nTPM: 8.5
P10809_1018
12.6
P10809_1037
14.5
P10809_1056
28.0
P10809_1075
11.2
P10809_1094
10.9
P10809_1106
8.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
27.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 17.1
Samples: 4
Max nTPM: 36.0
Min nTPM: 3.6
RHH5202_R3573
3.6
RHH5230_R3602
36.0
RHH5259_R3631
22.0
RHH5288_R3660
6.8
Effector memory CD8 T-cell nTPM: 21.9
Samples: 4
Max nTPM: 36.3
Min nTPM: 2.4
RHH5203_R3574
18.5
RHH5231_R3603
36.3
RHH5260_R3632
30.5
RHH5289_R3661
2.4
MAIT T-cell nTPM: 18.6
Samples: 4
Max nTPM: 35.3
Min nTPM: 5.7
RHH5233_R3605
5.7
RHH5205_R3576
14.0
RHH5262_R3634
35.3
RHH5297_R3663
19.4
Memory CD4 T-cell TFH nTPM: 21.2
Samples: 4
Max nTPM: 42.7
Min nTPM: 5.8
RHH5300_R3666
23.6
RHH5236_R3608
42.7
RHH5265_R3637
12.7
RHH5208_R3579
5.8
Memory CD4 T-cell Th1 nTPM: 19.2
Samples: 4
Max nTPM: 28.5
Min nTPM: 12.0
RHH5210_R3581
12.0
RHH5302_R3668
13.3
RHH5238_R3610
22.9
RHH5267_R3639
28.5
Memory CD4 T-cell Th1/Th17 nTPM: 20.6
Samples: 4
Max nTPM: 35.3
Min nTPM: 4.7
RHH5303_R3669
4.7
RHH5211_R3582
35.3
RHH5239_R3611
10.4
RHH5268_R3640
32.0
Memory CD4 T-cell Th17 nTPM: 22.3
Samples: 4
Max nTPM: 44.1
Min nTPM: 8.3
RHH5304_R3670
9.0
RHH5212_R3583
44.1
RHH5240_R3612
8.3
RHH5269_R3641
27.8
Memory CD4 T-cell Th2 nTPM: 25.8
Samples: 4
Max nTPM: 36.0
Min nTPM: 10.3
RHH5305_R3671
24.2
RHH5213_R3584
32.5
RHH5241_R3613
10.3
RHH5270_R3642
36.0
Naive CD4 T-cell nTPM: 20.7
Samples: 4
Max nTPM: 30.3
Min nTPM: 11.2
RHH5306_R3672
20.7
RHH5214_R3585
30.3
RHH5242_R3614
11.2
RHH5271_R3643
20.7
Naive CD8 T-cell nTPM: 11.6
Samples: 4
Max nTPM: 20.2
Min nTPM: 2.4
RHH5201_R3572
2.4
RHH5229_R3601
10.8
RHH5258_R3630
20.2
RHH5287_R3659
12.9
Non-Vd2 gdTCR nTPM: 21.0
Samples: 4
Max nTPM: 35.4
Min nTPM: 10.9
RHH5235_R3607
25.5
RHH5264_R3636
10.9
RHH5207_R3578
12.2
RHH5299_R3665
35.4
T-reg nTPM: 26.2
Samples: 4
Max nTPM: 27.7
Min nTPM: 24.7
RHH5301_R3667
24.7
RHH5237_R3609
27.7
RHH5266_R3638
25.3
RHH5209_R3580
27.0
Terminal effector memory CD4 T-cell nTPM: 21.0
Samples: 2
Max nTPM: 24.2
Min nTPM: 17.8
RHH5243_R3615
24.2
RHH5272_R3644
17.8
Terminal effector memory CD8 T-cell nTPM: 21.7
Samples: 4
Max nTPM: 35.7
Min nTPM: 9.8
RHH5232_R3604
18.2
RHH5204_R3575
22.9
RHH5261_R3633
35.7
RHH5296_R3662
9.8
Vd2 gdTCR nTPM: 27.2
Samples: 4
Max nTPM: 32.4
Min nTPM: 20.5
RHH5234_R3606
20.5
RHH5206_R3577
27.4
RHH5263_R3635
28.5
RHH5298_R3664
32.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
