HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:9.3 nTPM
HPA Brain:23.2 nTPM
GTEx:9.3 nTPM
FANTOM5:27.6 Scaled Tags Per Million
Pig:30.3 nTPM
Mouse:11.2 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.2
Sample id Sample description nTPM
Hippocampus
nTPM: 19.1
1898 Male, age 80, left hemisphere 27.7
1911 Female, age 85, right hemisphere 22.1
2529 Female, age 94, left hemisphere 18.7
2148 Female, age 91, left hemisphere 17.9
1855 Male, age 76, left hemisphere 16.2
2621 Female, age 67, right hemisphere 11.9
Dentate gyrus
nTPM: 20.0
2530 Female, age 94, left hemisphere 27.9
2010 Male, age 76, both hemispheres 27.3
2246 Female, age 85, both hemispheres 18.8
2531 Female, age 67, both hemispheres 17.9
2528 Male, age 74, both hemispheres 17.2
1927 Female, age 91, both hemispheres 11.0
Entorhinal gyrus
nTPM: 21.3
2117 Female, age 91, right hemisphere 32.9
2764 Male, age 80, right hemisphere 22.0
1938 Female, age 85, left hemisphere 20.8
1787 Male, age 76, left hemisphere 19.5
2686 Male, age 75, right hemisphere 17.5
2613 Female, age 94, left hemisphere 15.3
Hippocampus, CA1
nTPM: 19.3
2045 Male, age 76, both hemispheres 23.2
1873 Female, age 85, both hemispheres 21.0
2082 Female, age 91, right hemisphere 20.9
2527 Male, age 74, both hemispheres 16.8
2749 Male, age 80, left hemisphere 14.6
Hippocampus, CA2
nTPM: 22.1
1963 Male, age 80, left hemisphere 28.0
1940 Female, age 85, left hemisphere 23.1
2113 Female, age 91, right hemisphere 22.9
1892 Male, age 76, both hemispheres 21.7
2249 Male, age 74, both hemispheres 18.4
2437 Female, age 94, left hemisphere 18.4
Hippocampus, CA3
nTPM: 21.6
1867 Male, age 76, both hemispheres 28.4
2861 Female, age 67, both hemispheres 24.3
1891 Female, age 85, both hemispheres 21.6
2620 Female, age 94, left hemisphere 20.3
2436 Male, age 74, both hemispheres 19.3
2137 Male, age 80, left hemisphere 15.6
Parahippocampal cortex
nTPM: 18.4
1933 Female, age 85, both hemispheres 25.7
2018 Male, age 76, both hemispheres 20.0
2532 Female, age 72, left hemisphere 19.9
2692 Male, age 74, both hemispheres 18.9
2250 Female, age 67, right hemisphere 18.7
2693 Female, age 94, both hemispheres 18.6
1990 Female, age 91, right hemisphere 17.7
1850 Male, age 80, both hemispheres 17.4
2245 Female, age 91, both hemispheres 14.4
2622 Female, age 67, right hemisphere 12.4
Perirhinal gyrus
nTPM: 11.6
1847 Female, age 91, left hemisphere 14.3
1794 Male, age 80, right hemisphere 13.6
2848 Male, age 76, right hemisphere 13.2
2521 Female, age 94, right hemisphere 9.3
1841 Female, age 85, right hemisphere 7.5
Subiculum
nTPM: 23.2
2042 Male, age 76, both hemispheres 29.5
1901 Male, age 80, both hemispheres 29.1
1977 Female, age 85, both hemispheres 25.9
2729 Female, age 91, right hemisphere 23.6
2619 Male, age 74, both hemispheres 18.4
2438 Female, age 94, left hemisphere 13.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.3
Samples: 197

Max nTPM: 20.3
Min nTPM: 3.4
Std nTPM: 3.3
Median nTPM: 8.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 20.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 20.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 19.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 19.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 18.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 18.4
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 17.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 16.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 16.3
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 16.1
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 16.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.6
FF:10169-103B7 60 years, female 28.0
FF:10153-102I9 76 years, female 27.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.3
Pig sample Sample description nTPM
Subiculum
nTPM: 18.5
Samples: 4

Max nTPM: 19.9
Min nTPM: 17.0
Sample A Female 19.9
Sample B Female 19.6
Sample C Male 17.3
Sample D Male 17.0
Dorsal hippocampus
nTPM: 30.3
Samples: 4

Max nTPM: 40.0
Min nTPM: 17.2
Sample A Female 40.0
Sample B Female 26.5
Sample C Male 37.4
Sample D Male 17.2
Entorhinal cortex
nTPM: 18.9
Samples: 4

Max nTPM: 19.5
Min nTPM: 18.1
Sample A Female 19.5
Sample B Female 19.3
Sample C Male 18.1
Sample D Male 18.5
Ventral hippocampus
nTPM: 24.9
Samples: 4

Max nTPM: 29.0
Min nTPM: 15.6
Sample A Female 29.0
Sample B Female 15.6
Sample C Male 26.8
Sample D Male 28.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 11.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.7
Samples: 4

Max nTPM: 11.4
Min nTPM: 9.3
Sample A Male 11.0
Sample B Male 11.1
Sample C Female 11.4
Sample D Female 9.3
Hippocampal formation
nTPM: 11.2
Samples: 4

Max nTPM: 12.6
Min nTPM: 10.5
Sample A Male 10.9
Sample B Male 10.8
Sample C Female 12.6
Sample D Female 10.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
70429196 Antisense, RP_050614_01_B11, Mouse strain C57BL/6J (56 days, male) 0.1

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