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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
35.6
nTPM
Monaco:
118.7
nTPM
Schmiedel:
48.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
35.6
HPA sample
nTPM
gdT-cell nTPM: 35.6
Samples: 6
Max nTPM: 50.5
Min nTPM: 26.7
P10809_1007
27.6
P10809_1022
50.5
P10809_1041
38.4
P10809_1060
30.2
P10809_1077
26.7
P10809_1098
40.3
MAIT T-cell nTPM: 24.4
Samples: 6
Max nTPM: 30.9
Min nTPM: 14.0
P10809_1006
27.8
P10809_1024
22.6
P10809_1043
30.9
P10809_1062
20.8
P10809_1083
14.0
P10809_1097
30.5
Memory CD4 T-cell nTPM: 27.0
Samples: 6
Max nTPM: 32.0
Min nTPM: 22.5
P10809_1014
26.7
P10809_1026
25.4
P10809_1045
32.0
P10809_1064
22.5
P10809_1086
24.2
P10809_1113
31.2
Memory CD8 T-cell nTPM: 30.4
Samples: 5
Max nTPM: 40.8
Min nTPM: 16.0
P10809_1012
36.6
P10809_1027
16.0
P10809_1046
40.8
P10809_1065
29.8
P10809_1111
28.6
Naive CD4 T-cell nTPM: 27.8
Samples: 6
Max nTPM: 37.4
Min nTPM: 19.3
P10809_1015
21.3
P10809_1030
19.3
P10809_1049
27.1
P10809_1068
37.4
P10809_1085
33.6
P10809_1112
27.9
Naive CD8 T-cell nTPM: 24.0
Samples: 6
Max nTPM: 28.8
Min nTPM: 19.3
P10809_1016
22.1
P10809_1031
28.8
P10809_1050
19.3
P10809_1069
25.2
P10809_1087
20.9
P10809_1110
27.6
T-reg nTPM: 32.1
Samples: 6
Max nTPM: 44.3
Min nTPM: 20.8
P10809_1018
31.9
P10809_1037
44.3
P10809_1056
20.8
P10809_1075
36.1
P10809_1094
28.3
P10809_1106
31.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
118.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 106.2
Samples: 4
Max nTPM: 124.3
Min nTPM: 96.0
RHH5202_R3573
107.7
RHH5230_R3602
96.0
RHH5259_R3631
124.3
RHH5288_R3660
96.6
Effector memory CD8 T-cell nTPM: 115.2
Samples: 4
Max nTPM: 123.5
Min nTPM: 100.2
RHH5203_R3574
100.2
RHH5231_R3603
120.5
RHH5260_R3632
123.5
RHH5289_R3661
116.4
MAIT T-cell nTPM: 105.8
Samples: 4
Max nTPM: 141.5
Min nTPM: 77.1
RHH5233_R3605
108.9
RHH5205_R3576
141.5
RHH5262_R3634
77.1
RHH5297_R3663
95.6
Memory CD4 T-cell TFH nTPM: 97.4
Samples: 4
Max nTPM: 111.3
Min nTPM: 75.6
RHH5300_R3666
75.6
RHH5236_R3608
105.7
RHH5265_R3637
97.0
RHH5208_R3579
111.3
Memory CD4 T-cell Th1 nTPM: 98.7
Samples: 4
Max nTPM: 113.6
Min nTPM: 90.8
RHH5210_R3581
96.3
RHH5302_R3668
90.8
RHH5238_R3610
113.6
RHH5267_R3639
94.2
Memory CD4 T-cell Th1/Th17 nTPM: 111.1
Samples: 4
Max nTPM: 145.4
Min nTPM: 72.4
RHH5303_R3669
97.3
RHH5211_R3582
145.4
RHH5239_R3611
129.4
RHH5268_R3640
72.4
Memory CD4 T-cell Th17 nTPM: 109.1
Samples: 4
Max nTPM: 143.7
Min nTPM: 71.6
RHH5304_R3670
98.8
RHH5212_R3583
122.3
RHH5240_R3612
143.7
RHH5269_R3641
71.6
Memory CD4 T-cell Th2 nTPM: 104.4
Samples: 4
Max nTPM: 131.8
Min nTPM: 91.3
RHH5305_R3671
94.9
RHH5213_R3584
131.8
RHH5241_R3613
99.5
RHH5270_R3642
91.3
Naive CD4 T-cell nTPM: 107.8
Samples: 4
Max nTPM: 117.3
Min nTPM: 96.6
RHH5306_R3672
96.6
RHH5214_R3585
117.3
RHH5242_R3614
108.1
RHH5271_R3643
109.1
Naive CD8 T-cell nTPM: 107.5
Samples: 4
Max nTPM: 142.7
Min nTPM: 77.8
RHH5201_R3572
101.0
RHH5229_R3601
142.7
RHH5258_R3630
77.8
RHH5287_R3659
108.4
Non-Vd2 gdTCR nTPM: 118.7
Samples: 4
Max nTPM: 136.1
Min nTPM: 102.7
RHH5235_R3607
112.9
RHH5264_R3636
123.1
RHH5207_R3578
136.1
RHH5299_R3665
102.7
T-reg nTPM: 100.2
Samples: 4
Max nTPM: 120.4
Min nTPM: 81.2
RHH5301_R3667
81.2
RHH5237_R3609
120.4
RHH5266_R3638
88.4
RHH5209_R3580
110.7
Terminal effector memory CD4 T-cell nTPM: 116.8
Samples: 2
Max nTPM: 147.2
Min nTPM: 86.3
RHH5243_R3615
147.2
RHH5272_R3644
86.3
Terminal effector memory CD8 T-cell nTPM: 115.4
Samples: 4
Max nTPM: 123.2
Min nTPM: 104.9
RHH5232_R3604
123.2
RHH5204_R3575
114.8
RHH5261_R3633
104.9
RHH5296_R3662
118.7
Vd2 gdTCR nTPM: 98.8
Samples: 4
Max nTPM: 120.5
Min nTPM: 79.7
RHH5234_R3606
96.0
RHH5206_R3577
120.5
RHH5263_R3635
99.1
RHH5298_R3664
79.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
