We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
32.8
nTPM
Monaco:
47.1
nTPM
Schmiedel:
39.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
32.8
HPA sample
nTPM
gdT-cell nTPM: 26.7
Samples: 6
Max nTPM: 32.9
Min nTPM: 10.7
P10809_1007
32.9
P10809_1022
24.7
P10809_1041
29.3
P10809_1060
10.7
P10809_1077
31.4
P10809_1098
31.1
MAIT T-cell nTPM: 32.8
Samples: 6
Max nTPM: 45.5
Min nTPM: 19.5
P10809_1006
25.9
P10809_1024
19.5
P10809_1043
41.3
P10809_1062
20.5
P10809_1083
44.2
P10809_1097
45.5
Memory CD4 T-cell nTPM: 31.5
Samples: 6
Max nTPM: 50.5
Min nTPM: 13.0
P10809_1014
27.9
P10809_1026
44.7
P10809_1045
50.5
P10809_1064
33.0
P10809_1086
20.0
P10809_1113
13.0
Memory CD8 T-cell nTPM: 30.2
Samples: 5
Max nTPM: 47.2
Min nTPM: 21.5
P10809_1012
26.0
P10809_1027
21.5
P10809_1046
47.2
P10809_1065
27.5
P10809_1111
29.0
Naive CD4 T-cell nTPM: 23.5
Samples: 6
Max nTPM: 54.2
Min nTPM: 13.6
P10809_1015
16.8
P10809_1030
25.9
P10809_1049
54.2
P10809_1068
13.6
P10809_1085
15.3
P10809_1112
15.0
Naive CD8 T-cell nTPM: 22.5
Samples: 6
Max nTPM: 33.2
Min nTPM: 12.7
P10809_1016
15.1
P10809_1031
29.9
P10809_1050
25.7
P10809_1069
33.2
P10809_1087
12.7
P10809_1110
18.1
T-reg nTPM: 28.0
Samples: 6
Max nTPM: 53.4
Min nTPM: 13.3
P10809_1018
13.3
P10809_1037
34.1
P10809_1056
53.4
P10809_1075
27.9
P10809_1094
19.2
P10809_1106
19.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
47.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 26.1
Samples: 4
Max nTPM: 53.8
Min nTPM: 10.3
RHH5202_R3573
10.3
RHH5230_R3602
53.8
RHH5259_R3631
19.0
RHH5288_R3660
21.2
Effector memory CD8 T-cell nTPM: 34.1
Samples: 4
Max nTPM: 47.6
Min nTPM: 20.6
RHH5203_R3574
30.9
RHH5231_R3603
47.6
RHH5260_R3632
37.4
RHH5289_R3661
20.6
MAIT T-cell nTPM: 26.6
Samples: 4
Max nTPM: 30.7
Min nTPM: 22.2
RHH5233_R3605
30.7
RHH5205_R3576
23.8
RHH5262_R3634
29.6
RHH5297_R3663
22.2
Memory CD4 T-cell TFH nTPM: 29.4
Samples: 4
Max nTPM: 47.5
Min nTPM: 20.3
RHH5300_R3666
25.6
RHH5236_R3608
47.5
RHH5265_R3637
24.0
RHH5208_R3579
20.3
Memory CD4 T-cell Th1 nTPM: 20.3
Samples: 4
Max nTPM: 35.3
Min nTPM: 8.9
RHH5210_R3581
8.9
RHH5302_R3668
16.9
RHH5238_R3610
20.2
RHH5267_R3639
35.3
Memory CD4 T-cell Th1/Th17 nTPM: 26.7
Samples: 4
Max nTPM: 43.7
Min nTPM: 17.5
RHH5303_R3669
17.5
RHH5211_R3582
20.6
RHH5239_R3611
24.8
RHH5268_R3640
43.7
Memory CD4 T-cell Th17 nTPM: 27.9
Samples: 4
Max nTPM: 53.3
Min nTPM: 11.6
RHH5304_R3670
14.3
RHH5212_R3583
32.3
RHH5240_R3612
11.6
RHH5269_R3641
53.3
Memory CD4 T-cell Th2 nTPM: 28.8
Samples: 4
Max nTPM: 46.7
Min nTPM: 19.0
RHH5305_R3671
19.0
RHH5213_R3584
25.2
RHH5241_R3613
24.1
RHH5270_R3642
46.7
Naive CD4 T-cell nTPM: 17.4
Samples: 4
Max nTPM: 28.7
Min nTPM: 10.9
RHH5306_R3672
28.7
RHH5214_R3585
17.0
RHH5242_R3614
10.9
RHH5271_R3643
13.0
Naive CD8 T-cell nTPM: 13.6
Samples: 4
Max nTPM: 19.3
Min nTPM: 8.4
RHH5201_R3572
8.4
RHH5229_R3601
14.4
RHH5258_R3630
19.3
RHH5287_R3659
12.3
Non-Vd2 gdTCR nTPM: 41.0
Samples: 4
Max nTPM: 54.4
Min nTPM: 29.6
RHH5235_R3607
47.1
RHH5264_R3636
32.8
RHH5207_R3578
29.6
RHH5299_R3665
54.4
T-reg nTPM: 24.6
Samples: 4
Max nTPM: 33.1
Min nTPM: 17.3
RHH5301_R3667
28.1
RHH5237_R3609
33.1
RHH5266_R3638
19.9
RHH5209_R3580
17.3
Terminal effector memory CD4 T-cell nTPM: 34.5
Samples: 2
Max nTPM: 34.9
Min nTPM: 34.1
RHH5243_R3615
34.9
RHH5272_R3644
34.1
Terminal effector memory CD8 T-cell nTPM: 47.1
Samples: 4
Max nTPM: 57.7
Min nTPM: 42.0
RHH5232_R3604
46.2
RHH5204_R3575
42.4
RHH5261_R3633
57.7
RHH5296_R3662
42.0
Vd2 gdTCR nTPM: 39.4
Samples: 4
Max nTPM: 41.7
Min nTPM: 37.5
RHH5234_R3606
37.5
RHH5206_R3577
40.0
RHH5263_R3635
38.2
RHH5298_R3664
41.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
