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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
79.5
nTPM
Monaco:
88.6
nTPM
Schmiedel:
48.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
79.5
HPA sample
nTPM
gdT-cell nTPM: 28.6
Samples: 6
Max nTPM: 34.1
Min nTPM: 22.9
P10809_1007
22.9
P10809_1022
34.1
P10809_1041
29.4
P10809_1060
28.8
P10809_1077
29.2
P10809_1098
27.0
MAIT T-cell nTPM: 31.8
Samples: 6
Max nTPM: 45.2
Min nTPM: 21.1
P10809_1006
21.1
P10809_1024
45.2
P10809_1043
26.4
P10809_1062
25.5
P10809_1083
29.8
P10809_1097
42.9
Memory CD4 T-cell nTPM: 67.6
Samples: 6
Max nTPM: 85.4
Min nTPM: 60.3
P10809_1014
63.4
P10809_1026
85.4
P10809_1045
60.8
P10809_1064
60.3
P10809_1086
60.9
P10809_1113
74.7
Memory CD8 T-cell nTPM: 26.6
Samples: 5
Max nTPM: 29.3
Min nTPM: 23.0
P10809_1012
23.0
P10809_1027
28.9
P10809_1046
24.7
P10809_1065
29.3
P10809_1111
27.3
Naive CD4 T-cell nTPM: 79.5
Samples: 6
Max nTPM: 95.6
Min nTPM: 68.0
P10809_1015
68.0
P10809_1030
94.1
P10809_1049
95.6
P10809_1068
69.5
P10809_1085
69.5
P10809_1112
80.2
Naive CD8 T-cell nTPM: 25.7
Samples: 6
Max nTPM: 28.0
Min nTPM: 21.8
P10809_1016
21.8
P10809_1031
26.5
P10809_1050
27.4
P10809_1069
23.4
P10809_1087
27.0
P10809_1110
28.0
T-reg nTPM: 67.5
Samples: 6
Max nTPM: 86.3
Min nTPM: 51.6
P10809_1018
63.0
P10809_1037
67.3
P10809_1056
51.6
P10809_1075
63.8
P10809_1094
86.3
P10809_1106
73.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
88.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 37.3
Samples: 4
Max nTPM: 49.2
Min nTPM: 23.2
RHH5202_R3573
49.2
RHH5230_R3602
32.5
RHH5259_R3631
23.2
RHH5288_R3660
44.4
Effector memory CD8 T-cell nTPM: 36.3
Samples: 4
Max nTPM: 45.6
Min nTPM: 24.9
RHH5203_R3574
29.7
RHH5231_R3603
45.6
RHH5260_R3632
24.9
RHH5289_R3661
44.9
MAIT T-cell nTPM: 32.1
Samples: 4
Max nTPM: 34.7
Min nTPM: 30.9
RHH5233_R3605
31.7
RHH5205_R3576
30.9
RHH5262_R3634
31.0
RHH5297_R3663
34.7
Memory CD4 T-cell TFH nTPM: 88.6
Samples: 4
Max nTPM: 95.8
Min nTPM: 79.1
RHH5300_R3666
79.1
RHH5236_R3608
95.8
RHH5265_R3637
85.4
RHH5208_R3579
94.1
Memory CD4 T-cell Th1 nTPM: 73.8
Samples: 4
Max nTPM: 91.1
Min nTPM: 56.8
RHH5210_R3581
80.7
RHH5302_R3668
91.1
RHH5238_R3610
56.8
RHH5267_R3639
66.6
Memory CD4 T-cell Th1/Th17 nTPM: 62.6
Samples: 4
Max nTPM: 76.0
Min nTPM: 49.4
RHH5303_R3669
76.0
RHH5211_R3582
75.1
RHH5239_R3611
49.4
RHH5268_R3640
49.8
Memory CD4 T-cell Th17 nTPM: 59.7
Samples: 4
Max nTPM: 66.4
Min nTPM: 43.8
RHH5304_R3670
62.1
RHH5212_R3583
66.3
RHH5240_R3612
66.4
RHH5269_R3641
43.8
Memory CD4 T-cell Th2 nTPM: 69.0
Samples: 4
Max nTPM: 81.3
Min nTPM: 54.0
RHH5305_R3671
81.3
RHH5213_R3584
71.8
RHH5241_R3613
68.8
RHH5270_R3642
54.0
Naive CD4 T-cell nTPM: 83.2
Samples: 4
Max nTPM: 96.6
Min nTPM: 71.7
RHH5306_R3672
71.7
RHH5214_R3585
96.6
RHH5242_R3614
76.1
RHH5271_R3643
88.5
Naive CD8 T-cell nTPM: 35.8
Samples: 4
Max nTPM: 44.9
Min nTPM: 28.5
RHH5201_R3572
36.0
RHH5229_R3601
28.5
RHH5258_R3630
44.9
RHH5287_R3659
33.9
Non-Vd2 gdTCR nTPM: 30.2
Samples: 4
Max nTPM: 39.7
Min nTPM: 20.6
RHH5235_R3607
33.8
RHH5264_R3636
39.7
RHH5207_R3578
20.6
RHH5299_R3665
26.8
T-reg nTPM: 71.0
Samples: 4
Max nTPM: 96.2
Min nTPM: 54.3
RHH5301_R3667
64.0
RHH5237_R3609
96.2
RHH5266_R3638
54.3
RHH5209_R3580
69.4
Terminal effector memory CD4 T-cell nTPM: 48.1
Samples: 2
Max nTPM: 66.4
Min nTPM: 29.8
RHH5243_R3615
29.8
RHH5272_R3644
66.4
Terminal effector memory CD8 T-cell nTPM: 30.8
Samples: 4
Max nTPM: 33.8
Min nTPM: 27.0
RHH5232_R3604
28.9
RHH5204_R3575
27.0
RHH5261_R3633
33.8
RHH5296_R3662
33.3
Vd2 gdTCR nTPM: 34.0
Samples: 4
Max nTPM: 38.0
Min nTPM: 29.2
RHH5234_R3606
36.4
RHH5206_R3577
38.0
RHH5263_R3635
29.2
RHH5298_R3664
32.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
