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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
104.8
nTPM
Monaco:
449.1
nTPM
Schmiedel:
286.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
104.8
HPA sample
nTPM
gdT-cell nTPM: 42.9
Samples: 6
Max nTPM: 68.8
Min nTPM: 24.6
P10809_1007
55.1
P10809_1022
68.8
P10809_1041
48.8
P10809_1060
24.9
P10809_1077
24.6
P10809_1098
35.0
MAIT T-cell nTPM: 73.6
Samples: 6
Max nTPM: 99.0
Min nTPM: 42.6
P10809_1006
89.4
P10809_1024
99.0
P10809_1043
67.6
P10809_1062
88.2
P10809_1083
54.5
P10809_1097
42.6
Memory CD4 T-cell nTPM: 28.8
Samples: 6
Max nTPM: 45.6
Min nTPM: 14.9
P10809_1014
32.7
P10809_1026
30.4
P10809_1045
45.6
P10809_1064
14.9
P10809_1086
18.7
P10809_1113
30.3
Memory CD8 T-cell nTPM: 21.9
Samples: 5
Max nTPM: 36.1
Min nTPM: 12.3
P10809_1012
36.1
P10809_1027
12.3
P10809_1046
33.1
P10809_1065
13.3
P10809_1111
14.5
Naive CD4 T-cell nTPM: 104.8
Samples: 6
Max nTPM: 138.8
Min nTPM: 66.2
P10809_1015
98.2
P10809_1030
103.9
P10809_1049
138.8
P10809_1068
111.3
P10809_1085
66.2
P10809_1112
110.2
Naive CD8 T-cell nTPM: 64.7
Samples: 6
Max nTPM: 89.8
Min nTPM: 20.7
P10809_1016
82.7
P10809_1031
89.8
P10809_1050
70.4
P10809_1069
45.3
P10809_1087
20.7
P10809_1110
79.4
T-reg nTPM: 6.0
Samples: 6
Max nTPM: 10.5
Min nTPM: 1.2
P10809_1018
4.7
P10809_1037
9.9
P10809_1056
10.5
P10809_1075
6.3
P10809_1094
3.6
P10809_1106
1.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
449.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 195.2
Samples: 4
Max nTPM: 280.2
Min nTPM: 136.7
RHH5202_R3573
185.4
RHH5230_R3602
280.2
RHH5259_R3631
178.3
RHH5288_R3660
136.7
Effector memory CD8 T-cell nTPM: 67.9
Samples: 4
Max nTPM: 99.3
Min nTPM: 39.3
RHH5203_R3574
99.3
RHH5231_R3603
39.3
RHH5260_R3632
56.0
RHH5289_R3661
76.9
MAIT T-cell nTPM: 327.8
Samples: 4
Max nTPM: 410.0
Min nTPM: 257.1
RHH5233_R3605
360.1
RHH5205_R3576
410.0
RHH5262_R3634
283.8
RHH5297_R3663
257.1
Memory CD4 T-cell TFH nTPM: 128.8
Samples: 4
Max nTPM: 135.3
Min nTPM: 116.8
RHH5300_R3666
135.3
RHH5236_R3608
134.1
RHH5265_R3637
116.8
RHH5208_R3579
129.0
Memory CD4 T-cell Th1 nTPM: 234.4
Samples: 4
Max nTPM: 357.3
Min nTPM: 167.4
RHH5210_R3581
357.3
RHH5302_R3668
195.5
RHH5238_R3610
217.5
RHH5267_R3639
167.4
Memory CD4 T-cell Th1/Th17 nTPM: 207.8
Samples: 4
Max nTPM: 303.7
Min nTPM: 145.3
RHH5303_R3669
145.3
RHH5211_R3582
225.2
RHH5239_R3611
303.7
RHH5268_R3640
157.0
Memory CD4 T-cell Th17 nTPM: 209.0
Samples: 4
Max nTPM: 229.0
Min nTPM: 187.7
RHH5304_R3670
229.0
RHH5212_R3583
198.7
RHH5240_R3612
187.7
RHH5269_R3641
220.6
Memory CD4 T-cell Th2 nTPM: 204.3
Samples: 4
Max nTPM: 231.9
Min nTPM: 186.6
RHH5305_R3671
194.7
RHH5213_R3584
231.9
RHH5241_R3613
203.8
RHH5270_R3642
186.6
Naive CD4 T-cell nTPM: 449.1
Samples: 4
Max nTPM: 530.5
Min nTPM: 372.0
RHH5306_R3672
434.6
RHH5214_R3585
372.0
RHH5242_R3614
459.2
RHH5271_R3643
530.5
Naive CD8 T-cell nTPM: 417.5
Samples: 4
Max nTPM: 471.3
Min nTPM: 356.3
RHH5201_R3572
356.3
RHH5229_R3601
413.0
RHH5258_R3630
429.3
RHH5287_R3659
471.3
Non-Vd2 gdTCR nTPM: 79.1
Samples: 4
Max nTPM: 146.8
Min nTPM: 51.3
RHH5235_R3607
146.8
RHH5264_R3636
60.9
RHH5207_R3578
51.3
RHH5299_R3665
57.2
T-reg nTPM: 164.5
Samples: 4
Max nTPM: 199.1
Min nTPM: 137.1
RHH5301_R3667
137.1
RHH5237_R3609
143.4
RHH5266_R3638
178.3
RHH5209_R3580
199.1
Terminal effector memory CD4 T-cell nTPM: 104.4
Samples: 2
Max nTPM: 136.8
Min nTPM: 71.9
RHH5243_R3615
71.9
RHH5272_R3644
136.8
Terminal effector memory CD8 T-cell nTPM: 51.7
Samples: 4
Max nTPM: 70.3
Min nTPM: 41.9
RHH5232_R3604
48.4
RHH5204_R3575
41.9
RHH5261_R3633
70.3
RHH5296_R3662
46.3
Vd2 gdTCR nTPM: 296.9
Samples: 4
Max nTPM: 355.4
Min nTPM: 237.6
RHH5234_R3606
355.4
RHH5206_R3577
253.4
RHH5263_R3635
341.2
RHH5298_R3664
237.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
