HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:9.5 nTPM
HPA Brain:181.0 nTPM
GTEx:9.5 nTPM
FANTOM5:159.0 Scaled Tags Per Million
Pig:313.6 nTPM
Mouse:399.5 nTPM
Allen mouse:16.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA016810Antibody HPA023964
Glial cells Not detectedNot detected
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 181.0
Sample id Sample description nTPM
Hippocampus
nTPM: 154.1
1898 Male, age 80, left hemisphere 192.4
2148 Female, age 91, left hemisphere 165.2
2621 Female, age 67, right hemisphere 160.6
1855 Male, age 76, left hemisphere 155.6
1911 Female, age 85, right hemisphere 137.4
2529 Female, age 94, left hemisphere 113.1
Dentate gyrus
nTPM: 168.4
1927 Female, age 91, both hemispheres 222.9
2010 Male, age 76, both hemispheres 183.9
2531 Female, age 67, both hemispheres 170.6
2246 Female, age 85, both hemispheres 153.9
2530 Female, age 94, left hemisphere 143.7
2528 Male, age 74, both hemispheres 135.7
Entorhinal gyrus
nTPM: 132.0
1938 Female, age 85, left hemisphere 156.3
2764 Male, age 80, right hemisphere 141.6
2613 Female, age 94, left hemisphere 134.5
1787 Male, age 76, left hemisphere 128.1
2686 Male, age 75, right hemisphere 121.9
2117 Female, age 91, right hemisphere 109.6
Hippocampus, CA1
nTPM: 181.0
2749 Male, age 80, left hemisphere 275.9
1873 Female, age 85, both hemispheres 194.5
2045 Male, age 76, both hemispheres 162.6
2527 Male, age 74, both hemispheres 148.8
2082 Female, age 91, right hemisphere 123.2
Hippocampus, CA2
nTPM: 159.4
1963 Male, age 80, left hemisphere 261.1
1892 Male, age 76, both hemispheres 215.2
2113 Female, age 91, right hemisphere 126.8
2249 Male, age 74, both hemispheres 124.8
2437 Female, age 94, left hemisphere 124.7
1940 Female, age 85, left hemisphere 103.8
Hippocampus, CA3
nTPM: 166.6
2137 Male, age 80, left hemisphere 232.3
1867 Male, age 76, both hemispheres 180.9
2620 Female, age 94, left hemisphere 154.6
2861 Female, age 67, both hemispheres 150.7
2436 Male, age 74, both hemispheres 145.5
1891 Female, age 85, both hemispheres 135.6
Parahippocampal cortex
nTPM: 139.7
1850 Male, age 80, both hemispheres 165.7
2245 Female, age 91, both hemispheres 157.5
1933 Female, age 85, both hemispheres 155.3
1990 Female, age 91, right hemisphere 142.4
2250 Female, age 67, right hemisphere 142.3
2693 Female, age 94, both hemispheres 137.0
2532 Female, age 72, left hemisphere 136.2
2018 Male, age 76, both hemispheres 129.9
2622 Female, age 67, right hemisphere 125.3
2692 Male, age 74, both hemispheres 105.5
Perirhinal gyrus
nTPM: 160.6
1847 Female, age 91, left hemisphere 200.6
1794 Male, age 80, right hemisphere 163.8
2521 Female, age 94, right hemisphere 154.4
1841 Female, age 85, right hemisphere 154.3
2848 Male, age 76, right hemisphere 129.8
Subiculum
nTPM: 128.2
1901 Male, age 80, both hemispheres 146.6
1977 Female, age 85, both hemispheres 140.3
2729 Female, age 91, right hemisphere 136.2
2042 Male, age 76, both hemispheres 117.1
2438 Female, age 94, left hemisphere 116.5
2619 Male, age 74, both hemispheres 112.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.5
Samples: 197

Max nTPM: 32.2
Min nTPM: 0.5
Std nTPM: 5.9
Median nTPM: 8.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 32.2
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 31.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 27.3
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 26.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 24.6
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 23.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 23.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 23.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 22.0
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 21.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 21.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 159.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 159.0
FF:10169-103B7 60 years, female 169.2
FF:10153-102I9 76 years, female 148.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 313.6
Pig sample Sample description nTPM
Subiculum
nTPM: 313.6
Samples: 4

Max nTPM: 405.6
Min nTPM: 271.4
Sample A Female 405.6
Sample B Female 274.7
Sample C Male 302.5
Sample D Male 271.4
Dorsal hippocampus
nTPM: 281.2
Samples: 4

Max nTPM: 301.4
Min nTPM: 255.4
Sample A Female 301.4
Sample B Female 295.4
Sample C Male 272.6
Sample D Male 255.4
Entorhinal cortex
nTPM: 300.0
Samples: 4

Max nTPM: 333.2
Min nTPM: 278.6
Sample A Female 333.2
Sample B Female 301.6
Sample C Male 286.7
Sample D Male 278.6
Ventral hippocampus
nTPM: 289.6
Samples: 4

Max nTPM: 318.4
Min nTPM: 260.9
Sample A Female 318.4
Sample B Female 260.9
Sample C Male 291.7
Sample D Male 287.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 399.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 399.5
Samples: 4

Max nTPM: 430.0
Min nTPM: 358.7
Sample A Male 358.7
Sample B Male 422.1
Sample C Female 387.1
Sample D Female 430.0
Hippocampal formation
nTPM: 315.4
Samples: 4

Max nTPM: 353.8
Min nTPM: 281.4
Sample A Male 353.8
Sample B Male 319.6
Sample C Female 281.4
Sample D Female 306.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.8
1079 Antisense, RP_Baylor_103090, Mouse strain C57BL/6J (56 days, male) 16.8
1080 Antisense, RP_Baylor_103090, Mouse strain C57BL/6J (56 days, male) 10.2

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