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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
21.6
nTPM
Monaco:
127.0
nTPM
Schmiedel:
126.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
21.6
HPA sample
nTPM
gdT-cell nTPM: 12.6
Samples: 6
Max nTPM: 17.2
Min nTPM: 9.9
P10809_1007
12.2
P10809_1022
9.9
P10809_1041
17.2
P10809_1060
13.8
P10809_1077
11.5
P10809_1098
11.1
MAIT T-cell nTPM: 16.1
Samples: 6
Max nTPM: 23.0
Min nTPM: 7.8
P10809_1006
19.5
P10809_1024
16.6
P10809_1043
14.3
P10809_1062
23.0
P10809_1083
15.1
P10809_1097
7.8
Memory CD4 T-cell nTPM: 12.8
Samples: 6
Max nTPM: 16.2
Min nTPM: 10.2
P10809_1014
16.2
P10809_1026
10.5
P10809_1045
15.1
P10809_1064
14.1
P10809_1086
10.6
P10809_1113
10.2
Memory CD8 T-cell nTPM: 14.8
Samples: 5
Max nTPM: 21.1
Min nTPM: 11.4
P10809_1012
11.4
P10809_1027
15.0
P10809_1046
14.1
P10809_1065
21.1
P10809_1111
12.6
Naive CD4 T-cell nTPM: 21.6
Samples: 6
Max nTPM: 26.3
Min nTPM: 16.9
P10809_1015
23.2
P10809_1030
21.7
P10809_1049
26.3
P10809_1068
23.5
P10809_1085
16.9
P10809_1112
17.8
Naive CD8 T-cell nTPM: 14.0
Samples: 6
Max nTPM: 19.7
Min nTPM: 7.9
P10809_1016
19.7
P10809_1031
7.9
P10809_1050
14.4
P10809_1069
16.1
P10809_1087
10.7
P10809_1110
15.1
T-reg nTPM: 9.6
Samples: 6
Max nTPM: 19.4
Min nTPM: 4.9
P10809_1018
4.9
P10809_1037
9.8
P10809_1056
6.3
P10809_1075
19.4
P10809_1094
8.2
P10809_1106
9.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
127.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 103.0
Samples: 4
Max nTPM: 128.4
Min nTPM: 89.2
RHH5202_R3573
89.2
RHH5230_R3602
94.8
RHH5259_R3631
128.4
RHH5288_R3660
99.7
Effector memory CD8 T-cell nTPM: 71.3
Samples: 4
Max nTPM: 93.8
Min nTPM: 55.6
RHH5203_R3574
55.6
RHH5231_R3603
93.8
RHH5260_R3632
76.1
RHH5289_R3661
59.5
MAIT T-cell nTPM: 81.9
Samples: 4
Max nTPM: 92.4
Min nTPM: 69.8
RHH5233_R3605
76.9
RHH5205_R3576
92.4
RHH5262_R3634
88.6
RHH5297_R3663
69.8
Memory CD4 T-cell TFH nTPM: 83.1
Samples: 4
Max nTPM: 102.2
Min nTPM: 53.8
RHH5300_R3666
90.5
RHH5236_R3608
102.2
RHH5265_R3637
86.0
RHH5208_R3579
53.8
Memory CD4 T-cell Th1 nTPM: 89.8
Samples: 4
Max nTPM: 104.4
Min nTPM: 80.9
RHH5210_R3581
87.8
RHH5302_R3668
86.0
RHH5238_R3610
104.4
RHH5267_R3639
80.9
Memory CD4 T-cell Th1/Th17 nTPM: 74.0
Samples: 4
Max nTPM: 101.2
Min nTPM: 48.3
RHH5303_R3669
48.3
RHH5211_R3582
63.8
RHH5239_R3611
101.2
RHH5268_R3640
82.6
Memory CD4 T-cell Th17 nTPM: 85.9
Samples: 4
Max nTPM: 99.4
Min nTPM: 77.4
RHH5304_R3670
86.5
RHH5212_R3583
99.4
RHH5240_R3612
77.4
RHH5269_R3641
80.4
Memory CD4 T-cell Th2 nTPM: 86.3
Samples: 4
Max nTPM: 94.0
Min nTPM: 74.0
RHH5305_R3671
74.0
RHH5213_R3584
93.2
RHH5241_R3613
83.9
RHH5270_R3642
94.0
Naive CD4 T-cell nTPM: 114.4
Samples: 4
Max nTPM: 129.9
Min nTPM: 99.9
RHH5306_R3672
99.9
RHH5214_R3585
106.0
RHH5242_R3614
121.9
RHH5271_R3643
129.9
Naive CD8 T-cell nTPM: 127.0
Samples: 4
Max nTPM: 152.9
Min nTPM: 96.6
RHH5201_R3572
96.6
RHH5229_R3601
152.9
RHH5258_R3630
120.4
RHH5287_R3659
137.9
Non-Vd2 gdTCR nTPM: 72.9
Samples: 4
Max nTPM: 92.0
Min nTPM: 55.1
RHH5235_R3607
92.0
RHH5264_R3636
55.1
RHH5207_R3578
74.4
RHH5299_R3665
69.9
T-reg nTPM: 103.1
Samples: 4
Max nTPM: 125.7
Min nTPM: 73.5
RHH5301_R3667
73.5
RHH5237_R3609
125.7
RHH5266_R3638
106.0
RHH5209_R3580
107.1
Terminal effector memory CD4 T-cell nTPM: 80.5
Samples: 2
Max nTPM: 93.1
Min nTPM: 67.9
RHH5243_R3615
93.1
RHH5272_R3644
67.9
Terminal effector memory CD8 T-cell nTPM: 72.6
Samples: 4
Max nTPM: 82.5
Min nTPM: 66.8
RHH5232_R3604
71.7
RHH5204_R3575
69.4
RHH5261_R3633
82.5
RHH5296_R3662
66.8
Vd2 gdTCR nTPM: 81.1
Samples: 4
Max nTPM: 90.2
Min nTPM: 65.0
RHH5234_R3606
87.1
RHH5206_R3577
65.0
RHH5263_R3635
90.2
RHH5298_R3664
82.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
