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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
2382.3
nTPM
Monaco:
577.5
nTPM
Schmiedel:
535.5
TPM
B-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
2382.3
HPA sample
nTPM
Memory B-cell nTPM: 2382.3
Samples: 6
Max nTPM: 2884.1
Min nTPM: 1814.7
P10809_1017
1814.7
P10809_1025
2532.7
P10809_1044
2884.1
P10809_1063
2405.3
P10809_1092
2182.0
P10809_1105
2474.7
Naive B-cell nTPM: 2183.9
Samples: 6
Max nTPM: 2527.7
Min nTPM: 1668.9
P10809_1011
1668.9
P10809_1029
2134.8
P10809_1048
2382.2
P10809_1067
2382.2
P10809_1091
2007.3
P10809_1104
2527.7
B-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
577.5
Monaco sample
nTPM
Exhausted memory B-cell nTPM: 527.1
Samples: 4
Max nTPM: 863.7
Min nTPM: 140.4
RHH5310_R3677
419.4
RHH5218_R3590
140.4
RHH5247_R3619
863.7
RHH5276_R3648
684.9
Naive B-cell nTPM: 577.5
Samples: 4
Max nTPM: 1036.6
Min nTPM: 187.2
RHH5308_R3675
649.8
RHH5216_R3588
187.2
RHH5245_R3617
1036.6
RHH5274_R3646
436.4
Non-switched memory B-cell nTPM: 391.6
Samples: 4
Max nTPM: 656.3
Min nTPM: 175.1
RHH5309_R3676
557.3
RHH5217_R3589
177.6
RHH5246_R3618
175.1
RHH5275_R3647
656.3
Plasmablast nTPM: 432.0
Samples: 4
Max nTPM: 586.3
Min nTPM: 246.0
RHH5312_R3679
586.3
RHH5220_R3592
246.0
RHH5249_R3621
359.9
RHH5278_R3650
535.8
Switched memory B-cell nTPM: 359.6
Samples: 4
Max nTPM: 500.0
Min nTPM: 218.3
RHH5311_R3678
441.3
RHH5219_R3591
278.9
RHH5248_R3620
218.3
RHH5277_R3649
500.0
B-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
