We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
116.0
nTPM
Monaco:
147.5
nTPM
Schmiedel:
29.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
116.0
HPA sample
nTPM
gdT-cell nTPM: 7.5
Samples: 6
Max nTPM: 14.9
Min nTPM: 0.4
P10809_1007
1.2
P10809_1022
0.4
P10809_1041
14.9
P10809_1060
10.8
P10809_1077
7.7
P10809_1098
10.1
MAIT T-cell nTPM: 6.9
Samples: 6
Max nTPM: 15.3
Min nTPM: 1.0
P10809_1006
2.4
P10809_1024
1.0
P10809_1043
8.0
P10809_1062
15.3
P10809_1083
7.3
P10809_1097
7.1
Memory CD4 T-cell nTPM: 80.6
Samples: 6
Max nTPM: 165.1
Min nTPM: 21.5
P10809_1014
21.5
P10809_1026
59.9
P10809_1045
165.1
P10809_1064
86.7
P10809_1086
54.4
P10809_1113
95.7
Memory CD8 T-cell nTPM: 17.2
Samples: 5
Max nTPM: 31.0
Min nTPM: 4.7
P10809_1012
9.8
P10809_1027
4.7
P10809_1046
31.0
P10809_1065
15.2
P10809_1111
25.4
Naive CD4 T-cell nTPM: 17.9
Samples: 6
Max nTPM: 31.5
Min nTPM: 5.9
P10809_1015
12.9
P10809_1030
5.9
P10809_1049
31.5
P10809_1068
24.1
P10809_1085
15.8
P10809_1112
16.9
Naive CD8 T-cell nTPM: 4.5
Samples: 6
Max nTPM: 7.9
Min nTPM: 0.4
P10809_1016
6.4
P10809_1031
0.4
P10809_1050
7.9
P10809_1069
4.0
P10809_1087
1.9
P10809_1110
6.2
T-reg nTPM: 116.0
Samples: 6
Max nTPM: 307.2
Min nTPM: 12.5
P10809_1018
12.5
P10809_1037
47.5
P10809_1056
307.2
P10809_1075
112.8
P10809_1094
155.2
P10809_1106
60.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
147.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 44.5
Samples: 4
Max nTPM: 71.1
Min nTPM: 26.0
RHH5202_R3573
26.0
RHH5230_R3602
44.3
RHH5259_R3631
36.6
RHH5288_R3660
71.1
Effector memory CD8 T-cell nTPM: 17.1
Samples: 4
Max nTPM: 25.4
Min nTPM: 8.9
RHH5203_R3574
8.9
RHH5231_R3603
16.5
RHH5260_R3632
25.4
RHH5289_R3661
17.4
MAIT T-cell nTPM: 16.4
Samples: 4
Max nTPM: 25.1
Min nTPM: 5.8
RHH5233_R3605
17.5
RHH5205_R3576
5.8
RHH5262_R3634
17.0
RHH5297_R3663
25.1
Memory CD4 T-cell TFH nTPM: 109.1
Samples: 4
Max nTPM: 198.0
Min nTPM: 56.6
RHH5300_R3666
100.3
RHH5236_R3608
198.0
RHH5265_R3637
81.6
RHH5208_R3579
56.6
Memory CD4 T-cell Th1 nTPM: 65.1
Samples: 4
Max nTPM: 90.5
Min nTPM: 50.6
RHH5210_R3581
57.6
RHH5302_R3668
90.5
RHH5238_R3610
50.6
RHH5267_R3639
61.7
Memory CD4 T-cell Th1/Th17 nTPM: 65.7
Samples: 4
Max nTPM: 94.1
Min nTPM: 32.2
RHH5303_R3669
60.9
RHH5211_R3582
94.1
RHH5239_R3611
32.2
RHH5268_R3640
75.4
Memory CD4 T-cell Th17 nTPM: 124.7
Samples: 4
Max nTPM: 223.2
Min nTPM: 76.0
RHH5304_R3670
76.0
RHH5212_R3583
223.2
RHH5240_R3612
83.2
RHH5269_R3641
116.3
Memory CD4 T-cell Th2 nTPM: 147.5
Samples: 4
Max nTPM: 163.3
Min nTPM: 124.7
RHH5305_R3671
157.7
RHH5213_R3584
144.3
RHH5241_R3613
124.7
RHH5270_R3642
163.3
Naive CD4 T-cell nTPM: 37.6
Samples: 4
Max nTPM: 59.8
Min nTPM: 17.2
RHH5306_R3672
40.4
RHH5214_R3585
59.8
RHH5242_R3614
32.9
RHH5271_R3643
17.2
Naive CD8 T-cell nTPM: 8.4
Samples: 4
Max nTPM: 10.8
Min nTPM: 5.8
RHH5201_R3572
5.8
RHH5229_R3601
8.9
RHH5258_R3630
10.8
RHH5287_R3659
8.1
Non-Vd2 gdTCR nTPM: 12.6
Samples: 4
Max nTPM: 21.0
Min nTPM: 4.5
RHH5235_R3607
9.4
RHH5264_R3636
15.6
RHH5207_R3578
4.5
RHH5299_R3665
21.0
T-reg nTPM: 127.0
Samples: 4
Max nTPM: 176.4
Min nTPM: 88.2
RHH5301_R3667
133.2
RHH5237_R3609
176.4
RHH5266_R3638
88.2
RHH5209_R3580
110.3
Terminal effector memory CD4 T-cell nTPM: 5.3
Samples: 2
Max nTPM: 10.1
Min nTPM: 0.4
RHH5243_R3615
0.4
RHH5272_R3644
10.1
Terminal effector memory CD8 T-cell nTPM: 10.0
Samples: 4
Max nTPM: 16.0
Min nTPM: 5.6
RHH5232_R3604
5.6
RHH5204_R3575
6.1
RHH5261_R3633
12.3
RHH5296_R3662
16.0
Vd2 gdTCR nTPM: 26.4
Samples: 4
Max nTPM: 43.9
Min nTPM: 13.1
RHH5234_R3606
43.9
RHH5206_R3577
13.1
RHH5263_R3635
13.2
RHH5298_R3664
35.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
