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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
244.7
nTPM
Monaco:
615.5
nTPM
Schmiedel:
246.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
244.7
HPA sample
nTPM
gdT-cell nTPM: 195.6
Samples: 6
Max nTPM: 254.0
Min nTPM: 134.3
P10809_1007
134.3
P10809_1022
254.0
P10809_1041
235.1
P10809_1060
179.1
P10809_1077
181.0
P10809_1098
190.3
MAIT T-cell nTPM: 199.9
Samples: 6
Max nTPM: 258.3
Min nTPM: 167.2
P10809_1006
180.4
P10809_1024
258.3
P10809_1043
217.3
P10809_1062
194.7
P10809_1083
167.2
P10809_1097
181.5
Memory CD4 T-cell nTPM: 181.8
Samples: 6
Max nTPM: 196.5
Min nTPM: 150.5
P10809_1014
150.5
P10809_1026
194.1
P10809_1045
186.8
P10809_1064
189.7
P10809_1086
196.5
P10809_1113
173.4
Memory CD8 T-cell nTPM: 194.4
Samples: 5
Max nTPM: 222.5
Min nTPM: 176.3
P10809_1012
178.3
P10809_1027
222.5
P10809_1046
216.2
P10809_1065
178.9
P10809_1111
176.3
Naive CD4 T-cell nTPM: 176.4
Samples: 6
Max nTPM: 200.8
Min nTPM: 131.3
P10809_1015
131.3
P10809_1030
193.5
P10809_1049
186.5
P10809_1068
169.1
P10809_1085
200.8
P10809_1112
177.1
Naive CD8 T-cell nTPM: 171.5
Samples: 6
Max nTPM: 217.8
Min nTPM: 139.7
P10809_1016
139.7
P10809_1031
217.8
P10809_1050
168.6
P10809_1069
179.7
P10809_1087
181.4
P10809_1110
141.6
T-reg nTPM: 244.7
Samples: 6
Max nTPM: 314.0
Min nTPM: 198.1
P10809_1018
199.8
P10809_1037
246.7
P10809_1056
314.0
P10809_1075
232.3
P10809_1094
277.5
P10809_1106
198.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
615.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 467.2
Samples: 4
Max nTPM: 528.5
Min nTPM: 367.9
RHH5202_R3573
508.4
RHH5230_R3602
463.8
RHH5259_R3631
367.9
RHH5288_R3660
528.5
Effector memory CD8 T-cell nTPM: 615.6
Samples: 4
Max nTPM: 738.2
Min nTPM: 465.1
RHH5203_R3574
738.2
RHH5231_R3603
465.1
RHH5260_R3632
579.1
RHH5289_R3661
679.8
MAIT T-cell nTPM: 566.1
Samples: 4
Max nTPM: 673.7
Min nTPM: 487.3
RHH5233_R3605
594.0
RHH5205_R3576
673.7
RHH5262_R3634
487.3
RHH5297_R3663
509.3
Memory CD4 T-cell TFH nTPM: 481.3
Samples: 4
Max nTPM: 536.8
Min nTPM: 392.9
RHH5300_R3666
536.8
RHH5236_R3608
496.7
RHH5265_R3637
392.9
RHH5208_R3579
498.8
Memory CD4 T-cell Th1 nTPM: 449.8
Samples: 4
Max nTPM: 511.1
Min nTPM: 330.3
RHH5210_R3581
472.9
RHH5302_R3668
484.8
RHH5238_R3610
330.3
RHH5267_R3639
511.1
Memory CD4 T-cell Th1/Th17 nTPM: 502.5
Samples: 4
Max nTPM: 657.7
Min nTPM: 401.3
RHH5303_R3669
657.7
RHH5211_R3582
519.5
RHH5239_R3611
401.3
RHH5268_R3640
431.3
Memory CD4 T-cell Th17 nTPM: 514.6
Samples: 4
Max nTPM: 586.1
Min nTPM: 395.5
RHH5304_R3670
562.8
RHH5212_R3583
395.5
RHH5240_R3612
586.1
RHH5269_R3641
514.1
Memory CD4 T-cell Th2 nTPM: 465.8
Samples: 4
Max nTPM: 568.3
Min nTPM: 337.9
RHH5305_R3671
568.3
RHH5213_R3584
497.1
RHH5241_R3613
337.9
RHH5270_R3642
460.0
Naive CD4 T-cell nTPM: 418.2
Samples: 4
Max nTPM: 486.6
Min nTPM: 332.3
RHH5306_R3672
486.6
RHH5214_R3585
486.0
RHH5242_R3614
332.3
RHH5271_R3643
367.9
Naive CD8 T-cell nTPM: 370.1
Samples: 4
Max nTPM: 449.9
Min nTPM: 312.1
RHH5201_R3572
449.9
RHH5229_R3601
312.1
RHH5258_R3630
337.6
RHH5287_R3659
380.8
Non-Vd2 gdTCR nTPM: 555.9
Samples: 4
Max nTPM: 619.0
Min nTPM: 507.9
RHH5235_R3607
507.9
RHH5264_R3636
556.4
RHH5207_R3578
619.0
RHH5299_R3665
540.1
T-reg nTPM: 477.0
Samples: 4
Max nTPM: 533.4
Min nTPM: 427.1
RHH5301_R3667
479.7
RHH5237_R3609
533.4
RHH5266_R3638
427.1
RHH5209_R3580
467.7
Terminal effector memory CD4 T-cell nTPM: 510.9
Samples: 2
Max nTPM: 539.4
Min nTPM: 482.3
RHH5243_R3615
482.3
RHH5272_R3644
539.4
Terminal effector memory CD8 T-cell nTPM: 575.7
Samples: 4
Max nTPM: 664.1
Min nTPM: 534.0
RHH5232_R3604
543.4
RHH5204_R3575
534.0
RHH5261_R3633
561.4
RHH5296_R3662
664.1
Vd2 gdTCR nTPM: 476.2
Samples: 4
Max nTPM: 507.3
Min nTPM: 425.5
RHH5234_R3606
425.5
RHH5206_R3577
507.1
RHH5263_R3635
507.3
RHH5298_R3664
464.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.