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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
93.8
nTPM
Monaco:
371.8
nTPM
Schmiedel:
316.9
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
93.8
HPA sample
nTPM
gdT-cell nTPM: 81.9
Samples: 6
Max nTPM: 111.1
Min nTPM: 69.7
P10809_1007
75.3
P10809_1022
111.1
P10809_1041
69.7
P10809_1060
75.5
P10809_1077
83.9
P10809_1098
76.0
MAIT T-cell nTPM: 80.6
Samples: 6
Max nTPM: 93.6
Min nTPM: 63.0
P10809_1006
81.6
P10809_1024
93.6
P10809_1043
74.0
P10809_1062
85.2
P10809_1083
86.1
P10809_1097
63.0
Memory CD4 T-cell nTPM: 85.4
Samples: 6
Max nTPM: 92.9
Min nTPM: 79.8
P10809_1014
81.7
P10809_1026
85.8
P10809_1045
83.7
P10809_1064
79.8
P10809_1086
92.9
P10809_1113
88.6
Memory CD8 T-cell nTPM: 85.7
Samples: 5
Max nTPM: 102.4
Min nTPM: 72.0
P10809_1012
90.3
P10809_1027
78.8
P10809_1046
72.0
P10809_1065
85.1
P10809_1111
102.4
Naive CD4 T-cell nTPM: 71.3
Samples: 6
Max nTPM: 79.6
Min nTPM: 66.0
P10809_1015
73.7
P10809_1030
66.0
P10809_1049
70.4
P10809_1068
68.2
P10809_1085
79.6
P10809_1112
69.6
Naive CD8 T-cell nTPM: 70.4
Samples: 6
Max nTPM: 87.6
Min nTPM: 55.2
P10809_1016
63.1
P10809_1031
72.0
P10809_1050
62.5
P10809_1069
81.9
P10809_1087
87.6
P10809_1110
55.2
T-reg nTPM: 93.8
Samples: 6
Max nTPM: 116.3
Min nTPM: 71.9
P10809_1018
83.8
P10809_1037
100.3
P10809_1056
92.2
P10809_1075
71.9
P10809_1094
98.3
P10809_1106
116.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
371.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 295.1
Samples: 4
Max nTPM: 335.1
Min nTPM: 258.5
RHH5202_R3573
335.1
RHH5230_R3602
258.5
RHH5259_R3631
303.5
RHH5288_R3660
283.4
Effector memory CD8 T-cell nTPM: 352.6
Samples: 4
Max nTPM: 381.9
Min nTPM: 319.3
RHH5203_R3574
349.5
RHH5231_R3603
319.3
RHH5260_R3632
359.5
RHH5289_R3661
381.9
MAIT T-cell nTPM: 318.4
Samples: 4
Max nTPM: 381.5
Min nTPM: 273.3
RHH5233_R3605
291.4
RHH5205_R3576
381.5
RHH5262_R3634
327.4
RHH5297_R3663
273.3
Memory CD4 T-cell TFH nTPM: 247.5
Samples: 4
Max nTPM: 279.7
Min nTPM: 231.6
RHH5300_R3666
237.8
RHH5236_R3608
231.6
RHH5265_R3637
279.7
RHH5208_R3579
240.7
Memory CD4 T-cell Th1 nTPM: 271.5
Samples: 4
Max nTPM: 345.3
Min nTPM: 242.7
RHH5210_R3581
249.2
RHH5302_R3668
248.7
RHH5238_R3610
242.7
RHH5267_R3639
345.3
Memory CD4 T-cell Th1/Th17 nTPM: 316.6
Samples: 4
Max nTPM: 338.6
Min nTPM: 279.4
RHH5303_R3669
316.1
RHH5211_R3582
338.6
RHH5239_R3611
279.4
RHH5268_R3640
332.2
Memory CD4 T-cell Th17 nTPM: 309.7
Samples: 4
Max nTPM: 348.7
Min nTPM: 260.5
RHH5304_R3670
334.5
RHH5212_R3583
260.5
RHH5240_R3612
348.7
RHH5269_R3641
295.0
Memory CD4 T-cell Th2 nTPM: 313.4
Samples: 4
Max nTPM: 323.7
Min nTPM: 305.1
RHH5305_R3671
306.2
RHH5213_R3584
323.7
RHH5241_R3613
305.1
RHH5270_R3642
318.5
Naive CD4 T-cell nTPM: 196.1
Samples: 4
Max nTPM: 235.7
Min nTPM: 177.0
RHH5306_R3672
192.5
RHH5214_R3585
179.2
RHH5242_R3614
177.0
RHH5271_R3643
235.7
Naive CD8 T-cell nTPM: 188.9
Samples: 4
Max nTPM: 221.0
Min nTPM: 161.6
RHH5201_R3572
221.0
RHH5229_R3601
161.6
RHH5258_R3630
189.8
RHH5287_R3659
183.3
Non-Vd2 gdTCR nTPM: 358.9
Samples: 4
Max nTPM: 400.9
Min nTPM: 276.6
RHH5235_R3607
374.7
RHH5264_R3636
383.4
RHH5207_R3578
400.9
RHH5299_R3665
276.6
T-reg nTPM: 248.1
Samples: 4
Max nTPM: 284.4
Min nTPM: 200.6
RHH5301_R3667
200.6
RHH5237_R3609
284.4
RHH5266_R3638
272.1
RHH5209_R3580
235.1
Terminal effector memory CD4 T-cell nTPM: 371.8
Samples: 2
Max nTPM: 400.6
Min nTPM: 343.0
RHH5243_R3615
400.6
RHH5272_R3644
343.0
Terminal effector memory CD8 T-cell nTPM: 353.0
Samples: 4
Max nTPM: 414.0
Min nTPM: 315.4
RHH5232_R3604
350.0
RHH5204_R3575
315.4
RHH5261_R3633
414.0
RHH5296_R3662
332.4
Vd2 gdTCR nTPM: 323.8
Samples: 4
Max nTPM: 361.5
Min nTPM: 227.8
RHH5234_R3606
360.0
RHH5206_R3577
361.5
RHH5263_R3635
345.9
RHH5298_R3664
227.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.