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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
35.3
nTPM
Monaco:
151.9
nTPM
Schmiedel:
147.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
35.3
HPA sample
nTPM
gdT-cell nTPM: 33.7
Samples: 6
Max nTPM: 42.4
Min nTPM: 25.8
P10809_1007
41.6
P10809_1022
29.0
P10809_1041
26.5
P10809_1060
37.0
P10809_1077
42.4
P10809_1098
25.8
MAIT T-cell nTPM: 26.3
Samples: 6
Max nTPM: 37.1
Min nTPM: 16.2
P10809_1006
37.1
P10809_1024
32.1
P10809_1043
19.1
P10809_1062
28.5
P10809_1083
24.7
P10809_1097
16.2
Memory CD4 T-cell nTPM: 28.7
Samples: 6
Max nTPM: 34.4
Min nTPM: 24.6
P10809_1014
34.4
P10809_1026
30.7
P10809_1045
27.6
P10809_1064
30.3
P10809_1086
24.8
P10809_1113
24.6
Memory CD8 T-cell nTPM: 35.4
Samples: 5
Max nTPM: 39.6
Min nTPM: 28.3
P10809_1012
36.9
P10809_1027
39.6
P10809_1046
36.2
P10809_1065
35.8
P10809_1111
28.3
Naive CD4 T-cell nTPM: 30.2
Samples: 6
Max nTPM: 39.3
Min nTPM: 19.4
P10809_1015
37.4
P10809_1030
32.3
P10809_1049
30.6
P10809_1068
39.3
P10809_1085
19.4
P10809_1112
22.0
Naive CD8 T-cell nTPM: 31.4
Samples: 6
Max nTPM: 36.8
Min nTPM: 27.9
P10809_1016
36.8
P10809_1031
29.1
P10809_1050
29.6
P10809_1069
30.5
P10809_1087
34.3
P10809_1110
27.9
T-reg nTPM: 29.8
Samples: 6
Max nTPM: 38.7
Min nTPM: 19.3
P10809_1018
38.7
P10809_1037
27.2
P10809_1056
30.4
P10809_1075
29.5
P10809_1094
33.9
P10809_1106
19.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
151.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 139.5
Samples: 4
Max nTPM: 161.1
Min nTPM: 123.3
RHH5202_R3573
146.4
RHH5230_R3602
123.3
RHH5259_R3631
161.1
RHH5288_R3660
127.2
Effector memory CD8 T-cell nTPM: 116.3
Samples: 4
Max nTPM: 164.4
Min nTPM: 86.0
RHH5203_R3574
120.3
RHH5231_R3603
86.0
RHH5260_R3632
94.3
RHH5289_R3661
164.4
MAIT T-cell nTPM: 97.4
Samples: 4
Max nTPM: 124.5
Min nTPM: 72.0
RHH5233_R3605
111.7
RHH5205_R3576
124.5
RHH5262_R3634
81.5
RHH5297_R3663
72.0
Memory CD4 T-cell TFH nTPM: 128.3
Samples: 4
Max nTPM: 186.4
Min nTPM: 79.5
RHH5300_R3666
104.0
RHH5236_R3608
79.5
RHH5265_R3637
143.2
RHH5208_R3579
186.4
Memory CD4 T-cell Th1 nTPM: 117.1
Samples: 4
Max nTPM: 141.0
Min nTPM: 79.2
RHH5210_R3581
119.9
RHH5302_R3668
79.2
RHH5238_R3610
141.0
RHH5267_R3639
128.2
Memory CD4 T-cell Th1/Th17 nTPM: 107.3
Samples: 4
Max nTPM: 158.5
Min nTPM: 78.9
RHH5303_R3669
78.9
RHH5211_R3582
80.0
RHH5239_R3611
158.5
RHH5268_R3640
111.6
Memory CD4 T-cell Th17 nTPM: 103.0
Samples: 4
Max nTPM: 128.2
Min nTPM: 90.7
RHH5304_R3670
96.5
RHH5212_R3583
90.7
RHH5240_R3612
96.7
RHH5269_R3641
128.2
Memory CD4 T-cell Th2 nTPM: 94.4
Samples: 4
Max nTPM: 111.3
Min nTPM: 78.4
RHH5305_R3671
78.4
RHH5213_R3584
84.6
RHH5241_R3613
103.4
RHH5270_R3642
111.3
Naive CD4 T-cell nTPM: 106.8
Samples: 4
Max nTPM: 136.5
Min nTPM: 79.8
RHH5306_R3672
81.0
RHH5214_R3585
79.8
RHH5242_R3614
136.5
RHH5271_R3643
129.9
Naive CD8 T-cell nTPM: 119.7
Samples: 4
Max nTPM: 133.0
Min nTPM: 104.0
RHH5201_R3572
128.9
RHH5229_R3601
112.9
RHH5258_R3630
104.0
RHH5287_R3659
133.0
Non-Vd2 gdTCR nTPM: 132.6
Samples: 4
Max nTPM: 174.7
Min nTPM: 89.8
RHH5235_R3607
174.7
RHH5264_R3636
89.8
RHH5207_R3578
155.4
RHH5299_R3665
110.5
T-reg nTPM: 99.6
Samples: 4
Max nTPM: 135.0
Min nTPM: 77.1
RHH5301_R3667
100.2
RHH5237_R3609
77.1
RHH5266_R3638
135.0
RHH5209_R3580
86.0
Terminal effector memory CD4 T-cell nTPM: 151.9
Samples: 2
Max nTPM: 160.9
Min nTPM: 142.9
RHH5243_R3615
160.9
RHH5272_R3644
142.9
Terminal effector memory CD8 T-cell nTPM: 140.2
Samples: 4
Max nTPM: 166.7
Min nTPM: 122.7
RHH5232_R3604
139.0
RHH5204_R3575
166.7
RHH5261_R3633
122.7
RHH5296_R3662
132.5
Vd2 gdTCR nTPM: 92.7
Samples: 4
Max nTPM: 117.4
Min nTPM: 68.0
RHH5234_R3606
117.4
RHH5206_R3577
94.1
RHH5263_R3635
68.0
RHH5298_R3664
91.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
