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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
229.3
nTPM
Monaco:
25.5
nTPM
Schmiedel:
23.6
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
229.3
HPA sample
nTPM
gdT-cell nTPM: 188.6
Samples: 6
Max nTPM: 233.5
Min nTPM: 156.4
P10809_1007
161.4
P10809_1022
233.5
P10809_1041
217.3
P10809_1060
156.4
P10809_1077
167.4
P10809_1098
195.4
MAIT T-cell nTPM: 174.2
Samples: 6
Max nTPM: 239.5
Min nTPM: 90.7
P10809_1006
90.7
P10809_1024
174.9
P10809_1043
214.6
P10809_1062
184.7
P10809_1083
140.7
P10809_1097
239.5
Memory CD4 T-cell nTPM: 201.4
Samples: 6
Max nTPM: 257.9
Min nTPM: 131.0
P10809_1014
131.0
P10809_1026
257.9
P10809_1045
204.7
P10809_1064
228.9
P10809_1086
179.4
P10809_1113
206.7
Memory CD8 T-cell nTPM: 195.4
Samples: 5
Max nTPM: 256.8
Min nTPM: 132.9
P10809_1012
132.9
P10809_1027
199.9
P10809_1046
256.8
P10809_1065
211.3
P10809_1111
175.9
Naive CD4 T-cell nTPM: 182.3
Samples: 6
Max nTPM: 278.1
Min nTPM: 95.8
P10809_1015
95.8
P10809_1030
205.8
P10809_1049
278.1
P10809_1068
175.0
P10809_1085
167.3
P10809_1112
171.5
Naive CD8 T-cell nTPM: 187.9
Samples: 6
Max nTPM: 280.3
Min nTPM: 119.3
P10809_1016
119.3
P10809_1031
280.3
P10809_1050
184.8
P10809_1069
190.7
P10809_1087
197.5
P10809_1110
154.9
T-reg nTPM: 229.3
Samples: 6
Max nTPM: 335.9
Min nTPM: 146.3
P10809_1018
146.3
P10809_1037
190.8
P10809_1056
335.9
P10809_1075
277.1
P10809_1094
216.6
P10809_1106
209.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
25.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 17.0
Samples: 4
Max nTPM: 28.9
Min nTPM: 4.8
RHH5202_R3573
4.8
RHH5230_R3602
24.0
RHH5259_R3631
28.9
RHH5288_R3660
10.1
Effector memory CD8 T-cell nTPM: 13.3
Samples: 4
Max nTPM: 24.8
Min nTPM: 6.7
RHH5203_R3574
7.3
RHH5231_R3603
6.7
RHH5260_R3632
24.8
RHH5289_R3661
14.2
MAIT T-cell nTPM: 17.1
Samples: 4
Max nTPM: 30.6
Min nTPM: 10.4
RHH5233_R3605
10.4
RHH5205_R3576
30.6
RHH5262_R3634
16.7
RHH5297_R3663
10.8
Memory CD4 T-cell TFH nTPM: 14.3
Samples: 4
Max nTPM: 21.9
Min nTPM: 4.9
RHH5300_R3666
21.0
RHH5236_R3608
21.9
RHH5265_R3637
9.2
RHH5208_R3579
4.9
Memory CD4 T-cell Th1 nTPM: 25.5
Samples: 4
Max nTPM: 36.4
Min nTPM: 11.0
RHH5210_R3581
11.0
RHH5302_R3668
18.6
RHH5238_R3610
36.0
RHH5267_R3639
36.4
Memory CD4 T-cell Th1/Th17 nTPM: 18.4
Samples: 4
Max nTPM: 30.4
Min nTPM: 10.5
RHH5303_R3669
17.5
RHH5211_R3582
10.5
RHH5239_R3611
15.1
RHH5268_R3640
30.4
Memory CD4 T-cell Th17 nTPM: 15.1
Samples: 4
Max nTPM: 20.1
Min nTPM: 12.3
RHH5304_R3670
14.2
RHH5212_R3583
12.3
RHH5240_R3612
13.8
RHH5269_R3641
20.1
Memory CD4 T-cell Th2 nTPM: 18.8
Samples: 4
Max nTPM: 27.7
Min nTPM: 6.3
RHH5305_R3671
27.7
RHH5213_R3584
6.3
RHH5241_R3613
14.9
RHH5270_R3642
26.1
Naive CD4 T-cell nTPM: 17.5
Samples: 4
Max nTPM: 26.7
Min nTPM: 10.9
RHH5306_R3672
11.3
RHH5214_R3585
21.2
RHH5242_R3614
10.9
RHH5271_R3643
26.7
Naive CD8 T-cell nTPM: 14.7
Samples: 4
Max nTPM: 25.2
Min nTPM: 1.4
RHH5201_R3572
1.4
RHH5229_R3601
25.2
RHH5258_R3630
10.5
RHH5287_R3659
21.8
Non-Vd2 gdTCR nTPM: 18.4
Samples: 4
Max nTPM: 25.0
Min nTPM: 14.1
RHH5235_R3607
25.0
RHH5264_R3636
14.1
RHH5207_R3578
15.9
RHH5299_R3665
18.6
T-reg nTPM: 11.9
Samples: 4
Max nTPM: 13.5
Min nTPM: 10.6
RHH5301_R3667
11.3
RHH5237_R3609
12.0
RHH5266_R3638
13.5
RHH5209_R3580
10.6
Terminal effector memory CD4 T-cell nTPM: 18.2
Samples: 2
Max nTPM: 20.5
Min nTPM: 15.8
RHH5243_R3615
20.5
RHH5272_R3644
15.8
Terminal effector memory CD8 T-cell nTPM: 19.5
Samples: 4
Max nTPM: 31.0
Min nTPM: 6.7
RHH5232_R3604
6.7
RHH5204_R3575
21.6
RHH5261_R3633
31.0
RHH5296_R3662
18.6
Vd2 gdTCR nTPM: 24.7
Samples: 4
Max nTPM: 35.7
Min nTPM: 18.6
RHH5234_R3606
18.9
RHH5206_R3577
35.7
RHH5263_R3635
25.6
RHH5298_R3664
18.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
