We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
49.4
nTPM
Monaco:
68.4
nTPM
Schmiedel:
62.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
49.4
HPA sample
nTPM
gdT-cell nTPM: 42.7
Samples: 6
Max nTPM: 66.7
Min nTPM: 23.3
P10809_1007
31.8
P10809_1022
51.8
P10809_1041
66.7
P10809_1060
37.8
P10809_1077
23.3
P10809_1098
44.7
MAIT T-cell nTPM: 46.9
Samples: 6
Max nTPM: 64.3
Min nTPM: 33.7
P10809_1006
39.8
P10809_1024
57.0
P10809_1043
64.3
P10809_1062
50.7
P10809_1083
33.7
P10809_1097
35.7
Memory CD4 T-cell nTPM: 45.3
Samples: 6
Max nTPM: 68.4
Min nTPM: 33.5
P10809_1014
33.5
P10809_1026
68.4
P10809_1045
48.2
P10809_1064
35.1
P10809_1086
38.8
P10809_1113
47.9
Memory CD8 T-cell nTPM: 42.3
Samples: 5
Max nTPM: 52.4
Min nTPM: 34.4
P10809_1012
40.6
P10809_1027
34.4
P10809_1046
52.4
P10809_1065
44.1
P10809_1111
39.9
Naive CD4 T-cell nTPM: 43.0
Samples: 6
Max nTPM: 71.1
Min nTPM: 26.4
P10809_1015
26.4
P10809_1030
46.9
P10809_1049
71.1
P10809_1068
33.2
P10809_1085
35.0
P10809_1112
45.6
Naive CD8 T-cell nTPM: 40.1
Samples: 6
Max nTPM: 47.2
Min nTPM: 27.9
P10809_1016
27.9
P10809_1031
43.7
P10809_1050
39.1
P10809_1069
42.1
P10809_1087
40.7
P10809_1110
47.2
T-reg nTPM: 49.4
Samples: 6
Max nTPM: 63.7
Min nTPM: 35.8
P10809_1018
35.8
P10809_1037
38.9
P10809_1056
50.2
P10809_1075
63.7
P10809_1094
48.1
P10809_1106
59.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
68.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 59.4
Samples: 4
Max nTPM: 100.6
Min nTPM: 29.2
RHH5202_R3573
100.6
RHH5230_R3602
58.0
RHH5259_R3631
29.2
RHH5288_R3660
49.8
Effector memory CD8 T-cell nTPM: 58.3
Samples: 4
Max nTPM: 81.8
Min nTPM: 38.3
RHH5203_R3574
81.8
RHH5231_R3603
64.9
RHH5260_R3632
38.3
RHH5289_R3661
48.0
MAIT T-cell nTPM: 68.4
Samples: 4
Max nTPM: 81.3
Min nTPM: 54.3
RHH5233_R3605
81.3
RHH5205_R3576
54.3
RHH5262_R3634
72.0
RHH5297_R3663
66.0
Memory CD4 T-cell TFH nTPM: 56.4
Samples: 4
Max nTPM: 59.9
Min nTPM: 49.9
RHH5300_R3666
56.6
RHH5236_R3608
49.9
RHH5265_R3637
59.2
RHH5208_R3579
59.9
Memory CD4 T-cell Th1 nTPM: 49.9
Samples: 4
Max nTPM: 58.5
Min nTPM: 35.5
RHH5210_R3581
54.1
RHH5302_R3668
58.5
RHH5238_R3610
35.5
RHH5267_R3639
51.4
Memory CD4 T-cell Th1/Th17 nTPM: 56.9
Samples: 4
Max nTPM: 66.0
Min nTPM: 38.4
RHH5303_R3669
63.7
RHH5211_R3582
66.0
RHH5239_R3611
38.4
RHH5268_R3640
59.6
Memory CD4 T-cell Th17 nTPM: 54.9
Samples: 4
Max nTPM: 64.4
Min nTPM: 48.2
RHH5304_R3670
51.4
RHH5212_R3583
64.4
RHH5240_R3612
55.6
RHH5269_R3641
48.2
Memory CD4 T-cell Th2 nTPM: 59.0
Samples: 4
Max nTPM: 70.3
Min nTPM: 48.1
RHH5305_R3671
67.0
RHH5213_R3584
70.3
RHH5241_R3613
50.4
RHH5270_R3642
48.1
Naive CD4 T-cell nTPM: 53.7
Samples: 4
Max nTPM: 67.2
Min nTPM: 41.6
RHH5306_R3672
52.0
RHH5214_R3585
67.2
RHH5242_R3614
53.8
RHH5271_R3643
41.6
Naive CD8 T-cell nTPM: 54.9
Samples: 4
Max nTPM: 70.8
Min nTPM: 17.8
RHH5201_R3572
70.1
RHH5229_R3601
17.8
RHH5258_R3630
70.8
RHH5287_R3659
60.9
Non-Vd2 gdTCR nTPM: 57.8
Samples: 4
Max nTPM: 84.3
Min nTPM: 29.5
RHH5235_R3607
29.5
RHH5264_R3636
84.3
RHH5207_R3578
52.0
RHH5299_R3665
65.3
T-reg nTPM: 52.2
Samples: 4
Max nTPM: 69.0
Min nTPM: 44.4
RHH5301_R3667
44.4
RHH5237_R3609
69.0
RHH5266_R3638
47.8
RHH5209_R3580
47.6
Terminal effector memory CD4 T-cell nTPM: 55.5
Samples: 2
Max nTPM: 61.0
Min nTPM: 49.9
RHH5243_R3615
49.9
RHH5272_R3644
61.0
Terminal effector memory CD8 T-cell nTPM: 55.0
Samples: 4
Max nTPM: 72.7
Min nTPM: 36.5
RHH5232_R3604
72.7
RHH5204_R3575
52.8
RHH5261_R3633
36.5
RHH5296_R3662
58.1
Vd2 gdTCR nTPM: 55.4
Samples: 4
Max nTPM: 72.5
Min nTPM: 36.3
RHH5234_R3606
60.0
RHH5206_R3577
72.5
RHH5263_R3635
36.3
RHH5298_R3664
52.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
