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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
87.5
nTPM
Monaco:
136.9
nTPM
Schmiedel:
127.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
87.5
HPA sample
nTPM
gdT-cell nTPM: 48.5
Samples: 6
Max nTPM: 62.9
Min nTPM: 33.7
P10809_1007
33.7
P10809_1022
57.3
P10809_1041
51.4
P10809_1060
45.1
P10809_1077
40.8
P10809_1098
62.9
MAIT T-cell nTPM: 79.6
Samples: 6
Max nTPM: 110.5
Min nTPM: 57.3
P10809_1006
57.3
P10809_1024
110.5
P10809_1043
85.0
P10809_1062
93.4
P10809_1083
59.1
P10809_1097
72.4
Memory CD4 T-cell nTPM: 62.9
Samples: 6
Max nTPM: 77.0
Min nTPM: 48.8
P10809_1014
56.0
P10809_1026
77.0
P10809_1045
65.8
P10809_1064
48.8
P10809_1086
54.7
P10809_1113
74.9
Memory CD8 T-cell nTPM: 51.2
Samples: 5
Max nTPM: 56.1
Min nTPM: 43.0
P10809_1012
51.5
P10809_1027
49.6
P10809_1046
56.1
P10809_1065
43.0
P10809_1111
55.9
Naive CD4 T-cell nTPM: 59.9
Samples: 6
Max nTPM: 74.7
Min nTPM: 42.9
P10809_1015
42.9
P10809_1030
64.0
P10809_1049
74.7
P10809_1068
58.2
P10809_1085
53.4
P10809_1112
66.0
Naive CD8 T-cell nTPM: 41.1
Samples: 6
Max nTPM: 47.9
Min nTPM: 26.6
P10809_1016
26.6
P10809_1031
42.6
P10809_1050
41.0
P10809_1069
47.2
P10809_1087
41.2
P10809_1110
47.9
T-reg nTPM: 87.5
Samples: 6
Max nTPM: 109.9
Min nTPM: 67.8
P10809_1018
67.8
P10809_1037
94.4
P10809_1056
109.9
P10809_1075
71.7
P10809_1094
75.6
P10809_1106
105.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
136.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 82.0
Samples: 4
Max nTPM: 115.6
Min nTPM: 61.3
RHH5202_R3573
70.5
RHH5230_R3602
115.6
RHH5259_R3631
80.5
RHH5288_R3660
61.3
Effector memory CD8 T-cell nTPM: 98.8
Samples: 4
Max nTPM: 106.7
Min nTPM: 88.9
RHH5203_R3574
88.9
RHH5231_R3603
97.2
RHH5260_R3632
102.4
RHH5289_R3661
106.7
MAIT T-cell nTPM: 111.2
Samples: 4
Max nTPM: 150.1
Min nTPM: 93.5
RHH5233_R3605
105.0
RHH5205_R3576
150.1
RHH5262_R3634
93.5
RHH5297_R3663
96.3
Memory CD4 T-cell TFH nTPM: 73.8
Samples: 4
Max nTPM: 95.0
Min nTPM: 63.9
RHH5300_R3666
63.9
RHH5236_R3608
70.4
RHH5265_R3637
95.0
RHH5208_R3579
66.0
Memory CD4 T-cell Th1 nTPM: 103.3
Samples: 4
Max nTPM: 149.9
Min nTPM: 87.2
RHH5210_R3581
88.3
RHH5302_R3668
87.2
RHH5238_R3610
87.8
RHH5267_R3639
149.9
Memory CD4 T-cell Th1/Th17 nTPM: 114.5
Samples: 4
Max nTPM: 135.4
Min nTPM: 96.1
RHH5303_R3669
117.0
RHH5211_R3582
109.5
RHH5239_R3611
135.4
RHH5268_R3640
96.1
Memory CD4 T-cell Th17 nTPM: 136.9
Samples: 4
Max nTPM: 187.8
Min nTPM: 109.4
RHH5304_R3670
131.9
RHH5212_R3583
109.4
RHH5240_R3612
187.8
RHH5269_R3641
118.3
Memory CD4 T-cell Th2 nTPM: 125.7
Samples: 4
Max nTPM: 136.9
Min nTPM: 107.2
RHH5305_R3671
123.4
RHH5213_R3584
136.9
RHH5241_R3613
107.2
RHH5270_R3642
135.2
Naive CD4 T-cell nTPM: 98.9
Samples: 4
Max nTPM: 114.2
Min nTPM: 74.1
RHH5306_R3672
98.0
RHH5214_R3585
74.1
RHH5242_R3614
109.4
RHH5271_R3643
114.2
Naive CD8 T-cell nTPM: 80.6
Samples: 4
Max nTPM: 93.5
Min nTPM: 61.0
RHH5201_R3572
93.5
RHH5229_R3601
83.4
RHH5258_R3630
84.6
RHH5287_R3659
61.0
Non-Vd2 gdTCR nTPM: 87.9
Samples: 4
Max nTPM: 109.6
Min nTPM: 75.4
RHH5235_R3607
78.2
RHH5264_R3636
88.2
RHH5207_R3578
109.6
RHH5299_R3665
75.4
T-reg nTPM: 106.3
Samples: 4
Max nTPM: 110.8
Min nTPM: 94.1
RHH5301_R3667
94.1
RHH5237_R3609
109.5
RHH5266_R3638
110.7
RHH5209_R3580
110.8
Terminal effector memory CD4 T-cell nTPM: 85.7
Samples: 2
Max nTPM: 90.0
Min nTPM: 81.4
RHH5243_R3615
81.4
RHH5272_R3644
90.0
Terminal effector memory CD8 T-cell nTPM: 95.7
Samples: 4
Max nTPM: 113.4
Min nTPM: 63.3
RHH5232_R3604
109.1
RHH5204_R3575
63.3
RHH5261_R3633
113.4
RHH5296_R3662
97.0
Vd2 gdTCR nTPM: 86.4
Samples: 4
Max nTPM: 93.9
Min nTPM: 70.4
RHH5234_R3606
88.1
RHH5206_R3577
93.9
RHH5263_R3635
93.2
RHH5298_R3664
70.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
