HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:74.5 nTPM
HPA Brain:41.2 nTPM
GTEx:74.5 nTPM
FANTOM5:81.4 Scaled Tags Per Million
Pig:123.7 nTPM
Mouse:226.6 nTPM
Allen mouse:10.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 41.2
Sample id Sample description nTPM
Hippocampus
nTPM: 40.0
1898 Male, age 80, left hemisphere 52.8
1855 Male, age 76, left hemisphere 41.5
1911 Female, age 85, right hemisphere 40.3
2529 Female, age 94, left hemisphere 37.6
2621 Female, age 67, right hemisphere 35.3
2148 Female, age 91, left hemisphere 32.2
Dentate gyrus
nTPM: 38.0
2010 Male, age 76, both hemispheres 45.4
2528 Male, age 74, both hemispheres 44.4
1927 Female, age 91, both hemispheres 38.9
2246 Female, age 85, both hemispheres 37.2
2530 Female, age 94, left hemisphere 33.9
2531 Female, age 67, both hemispheres 28.4
Entorhinal gyrus
nTPM: 34.2
2117 Female, age 91, right hemisphere 41.9
1938 Female, age 85, left hemisphere 41.8
1787 Male, age 76, left hemisphere 36.6
2764 Male, age 80, right hemisphere 30.6
2686 Male, age 75, right hemisphere 27.4
2613 Female, age 94, left hemisphere 27.0
Hippocampus, CA1
nTPM: 41.2
2749 Male, age 80, left hemisphere 52.4
1873 Female, age 85, both hemispheres 43.8
2527 Male, age 74, both hemispheres 40.1
2082 Female, age 91, right hemisphere 35.7
2045 Male, age 76, both hemispheres 33.9
Hippocampus, CA2
nTPM: 41.1
2249 Male, age 74, both hemispheres 50.7
1963 Male, age 80, left hemisphere 45.2
1892 Male, age 76, both hemispheres 44.4
1940 Female, age 85, left hemisphere 37.4
2113 Female, age 91, right hemisphere 35.2
2437 Female, age 94, left hemisphere 33.9
Hippocampus, CA3
nTPM: 37.9
2436 Male, age 74, both hemispheres 53.2
1891 Female, age 85, both hemispheres 43.5
1867 Male, age 76, both hemispheres 41.2
2137 Male, age 80, left hemisphere 39.8
2620 Female, age 94, left hemisphere 27.1
2861 Female, age 67, both hemispheres 22.6
Parahippocampal cortex
nTPM: 35.9
1933 Female, age 85, both hemispheres 42.1
1990 Female, age 91, right hemisphere 42.0
1850 Male, age 80, both hemispheres 40.1
2250 Female, age 67, right hemisphere 39.5
2018 Male, age 76, both hemispheres 38.5
2693 Female, age 94, both hemispheres 37.2
2532 Female, age 72, left hemisphere 34.3
2692 Male, age 74, both hemispheres 32.0
2245 Female, age 91, both hemispheres 30.5
2622 Female, age 67, right hemisphere 22.3
Perirhinal gyrus
nTPM: 40.8
1841 Female, age 85, right hemisphere 45.1
2521 Female, age 94, right hemisphere 42.3
1794 Male, age 80, right hemisphere 40.1
1847 Female, age 91, left hemisphere 39.9
2848 Male, age 76, right hemisphere 36.6
Subiculum
nTPM: 37.6
1977 Female, age 85, both hemispheres 45.1
1901 Male, age 80, both hemispheres 40.4
2042 Male, age 76, both hemispheres 40.3
2729 Female, age 91, right hemisphere 36.5
2619 Male, age 74, both hemispheres 31.7
2438 Female, age 94, left hemisphere 31.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 74.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 74.5
Samples: 197

Max nTPM: 131.3
Min nTPM: 45.6
Std nTPM: 15.9
Median nTPM: 71.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 131.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 130.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 125.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 123.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 120.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 117.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 115.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 109.6
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 104.1
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 103.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 100.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 81.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 81.4
FF:10169-103B7 60 years, female 87.2
FF:10153-102I9 76 years, female 75.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 123.7
Pig sample Sample description nTPM
Subiculum
nTPM: 90.7
Samples: 4

Max nTPM: 126.4
Min nTPM: 72.5
Sample A Female 126.4
Sample B Female 83.9
Sample C Male 72.5
Sample D Male 79.8
Dorsal hippocampus
nTPM: 123.7
Samples: 4

Max nTPM: 183.6
Min nTPM: 90.6
Sample A Female 183.6
Sample B Female 111.8
Sample C Male 108.8
Sample D Male 90.6
Entorhinal cortex
nTPM: 92.0
Samples: 4

Max nTPM: 111.0
Min nTPM: 68.2
Sample A Female 97.3
Sample B Female 111.0
Sample C Male 91.6
Sample D Male 68.2
Ventral hippocampus
nTPM: 107.4
Samples: 4

Max nTPM: 125.3
Min nTPM: 75.9
Sample A Female 125.3
Sample B Female 75.9
Sample C Male 116.5
Sample D Male 111.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 226.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 196.7
Samples: 4

Max nTPM: 208.7
Min nTPM: 170.1
Sample A Male 207.2
Sample B Male 208.7
Sample C Female 200.8
Sample D Female 170.1
Hippocampal formation
nTPM: 226.6
Samples: 4

Max nTPM: 231.5
Min nTPM: 221.0
Sample A Male 231.5
Sample B Male 221.0
Sample C Female 223.9
Sample D Female 230.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.8
671225 Antisense, RP_040914_01_G11, Mouse strain C57BL/6J (56 days, male) 10.8

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