HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:14.5 nTPM
HPA Brain:29.4 nTPM
GTEx:14.5 nTPM
FANTOM5:25.4 Scaled Tags Per Million
Pig:22.7 nTPM
Mouse:21.9 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA077484
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.4
Sample id Sample description nTPM
Hippocampus
nTPM: 24.7
1898 Male, age 80, left hemisphere 44.3
1855 Male, age 76, left hemisphere 34.7
2621 Female, age 67, right hemisphere 21.7
2148 Female, age 91, left hemisphere 21.3
1911 Female, age 85, right hemisphere 15.9
2529 Female, age 94, left hemisphere 10.4
Dentate gyrus
nTPM: 23.8
2010 Male, age 76, both hemispheres 41.8
1927 Female, age 91, both hemispheres 26.3
2246 Female, age 85, both hemispheres 22.5
2530 Female, age 94, left hemisphere 20.4
2531 Female, age 67, both hemispheres 15.8
2528 Male, age 74, both hemispheres 15.7
Entorhinal gyrus
nTPM: 13.6
1938 Female, age 85, left hemisphere 20.3
1787 Male, age 76, left hemisphere 18.5
2613 Female, age 94, left hemisphere 13.5
2764 Male, age 80, right hemisphere 12.5
2686 Male, age 75, right hemisphere 8.5
2117 Female, age 91, right hemisphere 8.3
Hippocampus, CA1
nTPM: 29.4
2749 Male, age 80, left hemisphere 47.3
1873 Female, age 85, both hemispheres 43.8
2045 Male, age 76, both hemispheres 30.0
2527 Male, age 74, both hemispheres 13.8
2082 Female, age 91, right hemisphere 12.1
Hippocampus, CA2
nTPM: 24.0
1963 Male, age 80, left hemisphere 52.6
1892 Male, age 76, both hemispheres 37.0
1940 Female, age 85, left hemisphere 18.6
2437 Female, age 94, left hemisphere 13.3
2113 Female, age 91, right hemisphere 11.6
2249 Male, age 74, both hemispheres 10.8
Hippocampus, CA3
nTPM: 17.9
2861 Female, age 67, both hemispheres 20.7
2137 Male, age 80, left hemisphere 20.6
1867 Male, age 76, both hemispheres 19.4
1891 Female, age 85, both hemispheres 17.8
2620 Female, age 94, left hemisphere 15.9
2436 Male, age 74, both hemispheres 13.1
Parahippocampal cortex
nTPM: 12.8
1933 Female, age 85, both hemispheres 18.0
2018 Male, age 76, both hemispheres 16.1
2250 Female, age 67, right hemisphere 15.8
1990 Female, age 91, right hemisphere 14.7
1850 Male, age 80, both hemispheres 13.5
2693 Female, age 94, both hemispheres 11.1
2245 Female, age 91, both hemispheres 10.8
2692 Male, age 74, both hemispheres 10.1
2622 Female, age 67, right hemisphere 9.2
2532 Female, age 72, left hemisphere 8.8
Perirhinal gyrus
nTPM: 15.3
1847 Female, age 91, left hemisphere 20.7
2521 Female, age 94, right hemisphere 18.3
1841 Female, age 85, right hemisphere 14.3
1794 Male, age 80, right hemisphere 12.1
2848 Male, age 76, right hemisphere 11.1
Subiculum
nTPM: 13.7
1977 Female, age 85, both hemispheres 20.3
2729 Female, age 91, right hemisphere 15.5
1901 Male, age 80, both hemispheres 13.6
2042 Male, age 76, both hemispheres 12.6
2438 Female, age 94, left hemisphere 10.2
2619 Male, age 74, both hemispheres 10.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.5
Samples: 197

Max nTPM: 72.7
Min nTPM: 2.0
Std nTPM: 12.3
Median nTPM: 10.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 72.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 58.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 55.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 54.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 53.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 50.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 49.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 47.4
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 44.8
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 43.5
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 43.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 25.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 25.4
FF:10169-103B7 60 years, female 34.2
FF:10153-102I9 76 years, female 16.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.7
Pig sample Sample description nTPM
Subiculum
nTPM: 16.7
Samples: 4

Max nTPM: 19.9
Min nTPM: 13.1
Sample A Female 19.9
Sample B Female 15.5
Sample C Male 18.1
Sample D Male 13.1
Dorsal hippocampus
nTPM: 19.0
Samples: 4

Max nTPM: 24.5
Min nTPM: 6.6
Sample A Female 24.4
Sample B Female 24.5
Sample C Male 6.6
Sample D Male 20.5
Entorhinal cortex
nTPM: 7.6
Samples: 4

Max nTPM: 9.9
Min nTPM: 5.0
Sample A Female 9.0
Sample B Female 6.5
Sample C Male 9.9
Sample D Male 5.0
Ventral hippocampus
nTPM: 22.7
Samples: 4

Max nTPM: 32.7
Min nTPM: 11.1
Sample A Female 32.7
Sample B Female 16.5
Sample C Male 30.6
Sample D Male 11.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.1
Samples: 4

Max nTPM: 16.7
Min nTPM: 7.5
Sample A Male 8.5
Sample B Male 7.5
Sample C Female 15.6
Sample D Female 16.7
Hippocampal formation
nTPM: 22.0
Samples: 4

Max nTPM: 25.3
Min nTPM: 18.6
Sample A Male 20.3
Sample B Male 25.3
Sample C Female 23.6
Sample D Female 18.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
76097700 Antisense, RP_060620_02_A05, Mouse strain C57BL/6J (56 days, male) 4.2
77793195 Antisense, RP_070212_02_D06, Mouse strain C57BL/6J (56 days, male) 3.6
69447870 Antisense, RP_050419_02_C04, Mouse strain C57BL/6J (56 days, male) 3.5

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