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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
169.0
nTPM
Monaco:
54.3
nTPM
Schmiedel:
131.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
169.0
HPA sample
nTPM
gdT-cell nTPM: 103.7
Samples: 6
Max nTPM: 142.0
Min nTPM: 76.0
P10809_1007
85.5
P10809_1022
126.4
P10809_1041
142.0
P10809_1060
92.3
P10809_1077
76.0
P10809_1098
100.0
MAIT T-cell nTPM: 96.2
Samples: 6
Max nTPM: 124.6
Min nTPM: 58.7
P10809_1006
58.7
P10809_1024
111.2
P10809_1043
124.6
P10809_1062
95.4
P10809_1083
70.0
P10809_1097
117.2
Memory CD4 T-cell nTPM: 112.9
Samples: 6
Max nTPM: 142.2
Min nTPM: 75.9
P10809_1014
75.9
P10809_1026
142.2
P10809_1045
132.9
P10809_1064
133.8
P10809_1086
92.5
P10809_1113
100.2
Memory CD8 T-cell nTPM: 122.4
Samples: 5
Max nTPM: 165.1
Min nTPM: 72.3
P10809_1012
72.3
P10809_1027
143.4
P10809_1046
165.1
P10809_1065
125.8
P10809_1111
105.2
Naive CD4 T-cell nTPM: 108.0
Samples: 6
Max nTPM: 163.3
Min nTPM: 64.7
P10809_1015
64.7
P10809_1030
124.9
P10809_1049
163.3
P10809_1068
120.8
P10809_1085
77.8
P10809_1112
96.4
Naive CD8 T-cell nTPM: 99.4
Samples: 6
Max nTPM: 134.3
Min nTPM: 71.1
P10809_1016
71.1
P10809_1031
106.3
P10809_1050
121.5
P10809_1069
134.3
P10809_1087
81.9
P10809_1110
81.3
T-reg nTPM: 169.0
Samples: 6
Max nTPM: 237.1
Min nTPM: 120.0
P10809_1018
120.0
P10809_1037
148.3
P10809_1056
237.1
P10809_1075
167.3
P10809_1094
169.3
P10809_1106
171.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
54.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 32.3
Samples: 4
Max nTPM: 35.7
Min nTPM: 24.9
RHH5202_R3573
24.9
RHH5230_R3602
35.7
RHH5259_R3631
35.6
RHH5288_R3660
33.0
Effector memory CD8 T-cell nTPM: 29.7
Samples: 4
Max nTPM: 51.2
Min nTPM: 19.8
RHH5203_R3574
20.9
RHH5231_R3603
27.0
RHH5260_R3632
51.2
RHH5289_R3661
19.8
MAIT T-cell nTPM: 33.2
Samples: 4
Max nTPM: 41.4
Min nTPM: 28.0
RHH5233_R3605
30.2
RHH5205_R3576
33.1
RHH5262_R3634
41.4
RHH5297_R3663
28.0
Memory CD4 T-cell TFH nTPM: 45.1
Samples: 4
Max nTPM: 67.1
Min nTPM: 32.6
RHH5300_R3666
47.4
RHH5236_R3608
67.1
RHH5265_R3637
32.6
RHH5208_R3579
33.3
Memory CD4 T-cell Th1 nTPM: 54.4
Samples: 4
Max nTPM: 69.9
Min nTPM: 34.5
RHH5210_R3581
34.5
RHH5302_R3668
69.9
RHH5238_R3610
65.6
RHH5267_R3639
47.4
Memory CD4 T-cell Th1/Th17 nTPM: 42.2
Samples: 4
Max nTPM: 49.4
Min nTPM: 34.2
RHH5303_R3669
45.1
RHH5211_R3582
39.9
RHH5239_R3611
49.4
RHH5268_R3640
34.2
Memory CD4 T-cell Th17 nTPM: 41.1
Samples: 4
Max nTPM: 47.8
Min nTPM: 36.7
RHH5304_R3670
36.7
RHH5212_R3583
42.3
RHH5240_R3612
47.8
RHH5269_R3641
37.5
Memory CD4 T-cell Th2 nTPM: 41.0
Samples: 4
Max nTPM: 54.9
Min nTPM: 31.7
RHH5305_R3671
54.9
RHH5213_R3584
43.6
RHH5241_R3613
31.7
RHH5270_R3642
33.9
Naive CD4 T-cell nTPM: 50.1
Samples: 4
Max nTPM: 65.4
Min nTPM: 35.2
RHH5306_R3672
42.1
RHH5214_R3585
65.4
RHH5242_R3614
57.7
RHH5271_R3643
35.2
Naive CD8 T-cell nTPM: 36.0
Samples: 4
Max nTPM: 44.6
Min nTPM: 29.3
RHH5201_R3572
39.0
RHH5229_R3601
44.6
RHH5258_R3630
31.0
RHH5287_R3659
29.3
Non-Vd2 gdTCR nTPM: 46.9
Samples: 4
Max nTPM: 69.4
Min nTPM: 34.1
RHH5235_R3607
69.4
RHH5264_R3636
34.1
RHH5207_R3578
46.0
RHH5299_R3665
38.1
T-reg nTPM: 54.1
Samples: 4
Max nTPM: 64.7
Min nTPM: 32.8
RHH5301_R3667
60.6
RHH5237_R3609
64.7
RHH5266_R3638
32.8
RHH5209_R3580
58.4
Terminal effector memory CD4 T-cell nTPM: 30.6
Samples: 2
Max nTPM: 33.2
Min nTPM: 28.0
RHH5243_R3615
28.0
RHH5272_R3644
33.2
Terminal effector memory CD8 T-cell nTPM: 50.2
Samples: 4
Max nTPM: 96.8
Min nTPM: 22.1
RHH5232_R3604
22.1
RHH5204_R3575
96.8
RHH5261_R3633
45.5
RHH5296_R3662
36.4
Vd2 gdTCR nTPM: 46.0
Samples: 4
Max nTPM: 62.1
Min nTPM: 27.5
RHH5234_R3606
27.5
RHH5206_R3577
62.1
RHH5263_R3635
46.6
RHH5298_R3664
47.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
