HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:421.4 nTPM
HPA Brain:109.2 nTPM
GTEx:421.4 nTPM
FANTOM5:107.1 Scaled Tags Per Million
Pig:66.6 nTPM
Mouse:124.0 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063737
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 109.2
Sample id Sample description nTPM
Hippocampus
nTPM: 91.8
1898 Male, age 80, left hemisphere 139.0
1855 Male, age 76, left hemisphere 100.5
2621 Female, age 67, right hemisphere 88.1
2529 Female, age 94, left hemisphere 77.9
1911 Female, age 85, right hemisphere 76.6
2148 Female, age 91, left hemisphere 68.5
Dentate gyrus
nTPM: 81.3
1927 Female, age 91, both hemispheres 119.1
2010 Male, age 76, both hemispheres 94.5
2246 Female, age 85, both hemispheres 89.4
2531 Female, age 67, both hemispheres 64.5
2530 Female, age 94, left hemisphere 63.9
2528 Male, age 74, both hemispheres 56.2
Entorhinal gyrus
nTPM: 78.8
1938 Female, age 85, left hemisphere 97.1
2764 Male, age 80, right hemisphere 93.8
1787 Male, age 76, left hemisphere 78.1
2686 Male, age 75, right hemisphere 76.6
2117 Female, age 91, right hemisphere 64.4
2613 Female, age 94, left hemisphere 62.8
Hippocampus, CA1
nTPM: 93.6
2749 Male, age 80, left hemisphere 117.5
1873 Female, age 85, both hemispheres 101.7
2045 Male, age 76, both hemispheres 98.4
2082 Female, age 91, right hemisphere 75.8
2527 Male, age 74, both hemispheres 74.9
Hippocampus, CA2
nTPM: 98.6
1892 Male, age 76, both hemispheres 153.1
1963 Male, age 80, left hemisphere 109.4
2249 Male, age 74, both hemispheres 104.1
1940 Female, age 85, left hemisphere 89.4
2437 Female, age 94, left hemisphere 74.4
2113 Female, age 91, right hemisphere 60.9
Hippocampus, CA3
nTPM: 94.5
2436 Male, age 74, both hemispheres 131.2
1867 Male, age 76, both hemispheres 123.2
2137 Male, age 80, left hemisphere 98.2
1891 Female, age 85, both hemispheres 97.3
2620 Female, age 94, left hemisphere 63.5
2861 Female, age 67, both hemispheres 53.6
Parahippocampal cortex
nTPM: 85.7
1850 Male, age 80, both hemispheres 120.0
1933 Female, age 85, both hemispheres 113.5
2250 Female, age 67, right hemisphere 90.5
2018 Male, age 76, both hemispheres 89.1
2693 Female, age 94, both hemispheres 86.9
1990 Female, age 91, right hemisphere 85.9
2245 Female, age 91, both hemispheres 79.0
2532 Female, age 72, left hemisphere 70.7
2692 Male, age 74, both hemispheres 65.8
2622 Female, age 67, right hemisphere 55.4
Perirhinal gyrus
nTPM: 109.2
1847 Female, age 91, left hemisphere 138.9
1841 Female, age 85, right hemisphere 114.8
1794 Male, age 80, right hemisphere 111.7
2521 Female, age 94, right hemisphere 97.3
2848 Male, age 76, right hemisphere 83.3
Subiculum
nTPM: 89.2
1901 Male, age 80, both hemispheres 111.5
2438 Female, age 94, left hemisphere 98.4
2042 Male, age 76, both hemispheres 92.5
1977 Female, age 85, both hemispheres 85.8
2619 Male, age 74, both hemispheres 84.8
2729 Female, age 91, right hemisphere 62.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 421.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 421.4
Samples: 197

Max nTPM: 1818.6
Min nTPM: 195.8
Std nTPM: 166.1
Median nTPM: 404.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1818.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 933.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 856.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 845.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 811.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 803.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 746.3
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 734.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 710.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 709.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 687.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 107.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 107.1
FF:10169-103B7 60 years, female 132.9
FF:10153-102I9 76 years, female 81.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 66.6
Pig sample Sample description nTPM
Subiculum
nTPM: 44.0
Samples: 4

Max nTPM: 54.7
Min nTPM: 33.1
Sample A Female 54.7
Sample B Female 45.6
Sample C Male 33.1
Sample D Male 42.6
Dorsal hippocampus
nTPM: 66.6
Samples: 4

Max nTPM: 75.7
Min nTPM: 58.4
Sample A Female 75.7
Sample B Female 67.2
Sample C Male 65.0
Sample D Male 58.4
Entorhinal cortex
nTPM: 57.7
Samples: 4

Max nTPM: 87.8
Min nTPM: 39.9
Sample A Female 51.6
Sample B Female 87.8
Sample C Male 51.5
Sample D Male 39.9
Ventral hippocampus
nTPM: 52.3
Samples: 4

Max nTPM: 55.3
Min nTPM: 46.5
Sample A Female 52.5
Sample B Female 46.5
Sample C Male 55.3
Sample D Male 54.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 124.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 111.7
Samples: 4

Max nTPM: 132.1
Min nTPM: 92.7
Sample A Male 102.1
Sample B Male 119.7
Sample C Female 132.1
Sample D Female 92.7
Hippocampal formation
nTPM: 124.1
Samples: 4

Max nTPM: 150.9
Min nTPM: 111.9
Sample A Male 150.9
Sample B Male 118.5
Sample C Female 114.9
Sample D Female 111.9

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