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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
440.7
nTPM
Monaco:
35.0
nTPM
Schmiedel:
47.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
440.7
HPA sample
nTPM
gdT-cell nTPM: 248.4
Samples: 6
Max nTPM: 322.8
Min nTPM: 197.2
P10809_1007
294.4
P10809_1022
200.8
P10809_1041
226.5
P10809_1060
197.2
P10809_1077
322.8
P10809_1098
248.7
MAIT T-cell nTPM: 289.4
Samples: 6
Max nTPM: 321.5
Min nTPM: 229.5
P10809_1006
229.5
P10809_1024
313.4
P10809_1043
267.8
P10809_1062
287.3
P10809_1083
316.9
P10809_1097
321.5
Memory CD4 T-cell nTPM: 363.0
Samples: 6
Max nTPM: 410.2
Min nTPM: 310.5
P10809_1014
401.3
P10809_1026
355.5
P10809_1045
310.5
P10809_1064
333.1
P10809_1086
410.2
P10809_1113
367.6
Memory CD8 T-cell nTPM: 286.3
Samples: 5
Max nTPM: 335.8
Min nTPM: 218.9
P10809_1012
218.9
P10809_1027
335.8
P10809_1046
257.2
P10809_1065
293.9
P10809_1111
325.9
Naive CD4 T-cell nTPM: 356.9
Samples: 6
Max nTPM: 465.7
Min nTPM: 312.0
P10809_1015
465.7
P10809_1030
365.5
P10809_1049
343.0
P10809_1068
312.0
P10809_1085
317.0
P10809_1112
338.3
Naive CD8 T-cell nTPM: 345.4
Samples: 6
Max nTPM: 455.2
Min nTPM: 284.4
P10809_1016
455.2
P10809_1031
353.0
P10809_1050
299.2
P10809_1069
284.4
P10809_1087
369.2
P10809_1110
311.3
T-reg nTPM: 440.7
Samples: 6
Max nTPM: 505.4
Min nTPM: 371.0
P10809_1018
410.3
P10809_1037
505.4
P10809_1056
371.0
P10809_1075
487.4
P10809_1094
451.0
P10809_1106
419.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
35.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 29.0
Samples: 4
Max nTPM: 46.8
Min nTPM: 9.8
RHH5202_R3573
9.8
RHH5230_R3602
41.9
RHH5259_R3631
46.8
RHH5288_R3660
17.4
Effector memory CD8 T-cell nTPM: 20.1
Samples: 4
Max nTPM: 28.8
Min nTPM: 11.3
RHH5203_R3574
11.3
RHH5231_R3603
20.1
RHH5260_R3632
28.8
RHH5289_R3661
20.0
MAIT T-cell nTPM: 21.9
Samples: 4
Max nTPM: 37.7
Min nTPM: 11.5
RHH5233_R3605
11.5
RHH5205_R3576
20.6
RHH5262_R3634
37.7
RHH5297_R3663
17.8
Memory CD4 T-cell TFH nTPM: 16.2
Samples: 4
Max nTPM: 21.4
Min nTPM: 11.1
RHH5300_R3666
13.6
RHH5236_R3608
11.1
RHH5265_R3637
18.7
RHH5208_R3579
21.4
Memory CD4 T-cell Th1 nTPM: 35.0
Samples: 4
Max nTPM: 70.6
Min nTPM: 8.4
RHH5210_R3581
8.4
RHH5302_R3668
30.7
RHH5238_R3610
70.6
RHH5267_R3639
30.1
Memory CD4 T-cell Th1/Th17 nTPM: 24.4
Samples: 4
Max nTPM: 36.6
Min nTPM: 1.6
RHH5303_R3669
26.8
RHH5211_R3582
1.6
RHH5239_R3611
32.5
RHH5268_R3640
36.6
Memory CD4 T-cell Th17 nTPM: 23.1
Samples: 4
Max nTPM: 35.3
Min nTPM: 14.5
RHH5304_R3670
26.4
RHH5212_R3583
14.5
RHH5240_R3612
35.3
RHH5269_R3641
16.3
Memory CD4 T-cell Th2 nTPM: 24.9
Samples: 4
Max nTPM: 48.4
Min nTPM: 8.2
RHH5305_R3671
48.4
RHH5213_R3584
11.0
RHH5241_R3613
8.2
RHH5270_R3642
32.1
Naive CD4 T-cell nTPM: 25.1
Samples: 4
Max nTPM: 31.9
Min nTPM: 15.9
RHH5306_R3672
31.9
RHH5214_R3585
15.9
RHH5242_R3614
22.0
RHH5271_R3643
30.5
Naive CD8 T-cell nTPM: 28.2
Samples: 4
Max nTPM: 51.6
Min nTPM: 10.1
RHH5201_R3572
10.1
RHH5229_R3601
51.6
RHH5258_R3630
13.3
RHH5287_R3659
37.7
Non-Vd2 gdTCR nTPM: 27.1
Samples: 4
Max nTPM: 36.7
Min nTPM: 20.8
RHH5235_R3607
36.7
RHH5264_R3636
20.8
RHH5207_R3578
21.7
RHH5299_R3665
29.2
T-reg nTPM: 26.8
Samples: 4
Max nTPM: 38.8
Min nTPM: 17.8
RHH5301_R3667
24.7
RHH5237_R3609
17.8
RHH5266_R3638
38.8
RHH5209_R3580
26.0
Terminal effector memory CD4 T-cell nTPM: 33.9
Samples: 2
Max nTPM: 41.9
Min nTPM: 25.9
RHH5243_R3615
41.9
RHH5272_R3644
25.9
Terminal effector memory CD8 T-cell nTPM: 27.8
Samples: 4
Max nTPM: 43.8
Min nTPM: 13.5
RHH5232_R3604
13.5
RHH5204_R3575
32.7
RHH5261_R3633
43.8
RHH5296_R3662
21.3
Vd2 gdTCR nTPM: 28.3
Samples: 4
Max nTPM: 41.4
Min nTPM: 16.4
RHH5234_R3606
17.9
RHH5206_R3577
41.4
RHH5263_R3635
37.6
RHH5298_R3664
16.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
