HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:12.1 nTPM
HPA Brain:26.5 nTPM
GTEx:12.1 nTPM
FANTOM5:60.6 Scaled Tags Per Million
Pig:52.2 nTPM
Mouse:46.5 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA013407
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.5
Sample id Sample description nTPM
Hippocampus
nTPM: 16.8
1898 Male, age 80, left hemisphere 25.1
1855 Male, age 76, left hemisphere 19.5
2621 Female, age 67, right hemisphere 19.1
1911 Female, age 85, right hemisphere 17.9
2148 Female, age 91, left hemisphere 10.5
2529 Female, age 94, left hemisphere 8.9
Dentate gyrus
nTPM: 16.0
2010 Male, age 76, both hemispheres 23.3
1927 Female, age 91, both hemispheres 22.5
2531 Female, age 67, both hemispheres 15.6
2530 Female, age 94, left hemisphere 12.9
2528 Male, age 74, both hemispheres 11.1
2246 Female, age 85, both hemispheres 10.5
Entorhinal gyrus
nTPM: 8.3
1787 Male, age 76, left hemisphere 10.4
2764 Male, age 80, right hemisphere 9.5
1938 Female, age 85, left hemisphere 9.0
2117 Female, age 91, right hemisphere 7.8
2686 Male, age 75, right hemisphere 7.3
2613 Female, age 94, left hemisphere 5.6
Hippocampus, CA1
nTPM: 26.5
2749 Male, age 80, left hemisphere 58.8
2527 Male, age 74, both hemispheres 22.4
1873 Female, age 85, both hemispheres 21.6
2045 Male, age 76, both hemispheres 15.4
2082 Female, age 91, right hemisphere 14.2
Hippocampus, CA2
nTPM: 18.2
1963 Male, age 80, left hemisphere 27.8
2249 Male, age 74, both hemispheres 20.0
1892 Male, age 76, both hemispheres 18.2
1940 Female, age 85, left hemisphere 17.2
2113 Female, age 91, right hemisphere 16.6
2437 Female, age 94, left hemisphere 9.7
Hippocampus, CA3
nTPM: 21.6
2137 Male, age 80, left hemisphere 50.8
2436 Male, age 74, both hemispheres 23.8
2620 Female, age 94, left hemisphere 17.6
1867 Male, age 76, both hemispheres 14.9
2861 Female, age 67, both hemispheres 13.6
1891 Female, age 85, both hemispheres 8.8
Parahippocampal cortex
nTPM: 15.3
2245 Female, age 91, both hemispheres 22.4
2693 Female, age 94, both hemispheres 18.6
2018 Male, age 76, both hemispheres 17.8
2250 Female, age 67, right hemisphere 17.8
1850 Male, age 80, both hemispheres 15.5
1933 Female, age 85, both hemispheres 14.1
2622 Female, age 67, right hemisphere 13.1
2532 Female, age 72, left hemisphere 12.0
2692 Male, age 74, both hemispheres 11.0
1990 Female, age 91, right hemisphere 10.4
Perirhinal gyrus
nTPM: 18.4
1841 Female, age 85, right hemisphere 22.5
2521 Female, age 94, right hemisphere 21.9
1794 Male, age 80, right hemisphere 18.7
1847 Female, age 91, left hemisphere 17.2
2848 Male, age 76, right hemisphere 11.9
Subiculum
nTPM: 11.5
1901 Male, age 80, both hemispheres 21.5
2042 Male, age 76, both hemispheres 12.6
2619 Male, age 74, both hemispheres 11.6
2729 Female, age 91, right hemisphere 10.3
1977 Female, age 85, both hemispheres 7.3
2438 Female, age 94, left hemisphere 5.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.1
Samples: 197

Max nTPM: 61.6
Min nTPM: 0.3
Std nTPM: 9.8
Median nTPM: 9.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 61.6
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 45.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 43.9
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 42.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 36.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 34.8
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 34.0
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 33.6
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 33.1
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 33.1
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 31.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.6
FF:10169-103B7 60 years, female 92.4
FF:10153-102I9 76 years, female 28.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 52.2
Pig sample Sample description nTPM
Subiculum
nTPM: 37.5
Samples: 4

Max nTPM: 49.2
Min nTPM: 31.2
Sample A Female 34.5
Sample B Female 34.9
Sample C Male 31.2
Sample D Male 49.2
Dorsal hippocampus
nTPM: 41.0
Samples: 4

Max nTPM: 57.7
Min nTPM: 20.3
Sample A Female 57.7
Sample B Female 51.7
Sample C Male 20.3
Sample D Male 34.1
Entorhinal cortex
nTPM: 52.2
Samples: 4

Max nTPM: 66.3
Min nTPM: 35.0
Sample A Female 66.3
Sample B Female 49.5
Sample C Male 58.0
Sample D Male 35.0
Ventral hippocampus
nTPM: 29.6
Samples: 4

Max nTPM: 61.6
Min nTPM: 13.8
Sample A Female 27.6
Sample B Female 15.4
Sample C Male 13.8
Sample D Male 61.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 46.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.5
Samples: 4

Max nTPM: 43.1
Min nTPM: 27.5
Sample A Male 27.5
Sample B Male 31.1
Sample C Female 28.1
Sample D Female 43.1
Hippocampal formation
nTPM: 46.5
Samples: 4

Max nTPM: 55.8
Min nTPM: 35.1
Sample A Male 48.0
Sample B Male 47.1
Sample C Female 55.8
Sample D Female 35.1

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