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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
95.6
nTPM
Monaco:
282.4
nTPM
Schmiedel:
136.7
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
95.6
HPA sample
nTPM
gdT-cell nTPM: 88.0
Samples: 6
Max nTPM: 109.3
Min nTPM: 64.0
P10809_1007
69.3
P10809_1022
107.4
P10809_1041
109.3
P10809_1060
64.0
P10809_1077
94.3
P10809_1098
83.9
MAIT T-cell nTPM: 92.0
Samples: 6
Max nTPM: 128.4
Min nTPM: 66.3
P10809_1006
79.9
P10809_1024
128.4
P10809_1043
83.4
P10809_1062
66.3
P10809_1083
88.6
P10809_1097
105.6
Memory CD4 T-cell nTPM: 77.3
Samples: 6
Max nTPM: 89.8
Min nTPM: 64.3
P10809_1014
68.5
P10809_1026
64.3
P10809_1045
88.5
P10809_1064
78.0
P10809_1086
89.8
P10809_1113
74.9
Memory CD8 T-cell nTPM: 91.0
Samples: 5
Max nTPM: 100.9
Min nTPM: 69.5
P10809_1012
69.5
P10809_1027
100.9
P10809_1046
94.8
P10809_1065
91.8
P10809_1111
98.2
Naive CD4 T-cell nTPM: 55.2
Samples: 6
Max nTPM: 76.3
Min nTPM: 40.9
P10809_1015
51.3
P10809_1030
76.3
P10809_1049
55.6
P10809_1068
40.9
P10809_1085
55.3
P10809_1112
51.9
Naive CD8 T-cell nTPM: 76.8
Samples: 6
Max nTPM: 110.4
Min nTPM: 53.7
P10809_1016
54.5
P10809_1031
77.1
P10809_1050
76.0
P10809_1069
89.1
P10809_1087
110.4
P10809_1110
53.7
T-reg nTPM: 95.6
Samples: 6
Max nTPM: 116.4
Min nTPM: 71.8
P10809_1018
81.9
P10809_1037
116.4
P10809_1056
105.6
P10809_1075
71.8
P10809_1094
82.4
P10809_1106
115.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
282.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 182.7
Samples: 4
Max nTPM: 203.2
Min nTPM: 163.9
RHH5202_R3573
192.6
RHH5230_R3602
203.2
RHH5259_R3631
171.2
RHH5288_R3660
163.9
Effector memory CD8 T-cell nTPM: 269.3
Samples: 4
Max nTPM: 305.8
Min nTPM: 203.9
RHH5203_R3574
203.9
RHH5231_R3603
294.1
RHH5260_R3632
273.5
RHH5289_R3661
305.8
MAIT T-cell nTPM: 202.0
Samples: 4
Max nTPM: 224.5
Min nTPM: 172.8
RHH5233_R3605
221.4
RHH5205_R3576
189.2
RHH5262_R3634
224.5
RHH5297_R3663
172.8
Memory CD4 T-cell TFH nTPM: 147.2
Samples: 4
Max nTPM: 179.4
Min nTPM: 126.1
RHH5300_R3666
137.6
RHH5236_R3608
179.4
RHH5265_R3637
126.1
RHH5208_R3579
145.7
Memory CD4 T-cell Th1 nTPM: 143.1
Samples: 4
Max nTPM: 157.1
Min nTPM: 130.2
RHH5210_R3581
130.2
RHH5302_R3668
147.5
RHH5238_R3610
137.6
RHH5267_R3639
157.1
Memory CD4 T-cell Th1/Th17 nTPM: 207.2
Samples: 4
Max nTPM: 241.4
Min nTPM: 154.6
RHH5303_R3669
208.3
RHH5211_R3582
241.4
RHH5239_R3611
224.6
RHH5268_R3640
154.6
Memory CD4 T-cell Th17 nTPM: 201.8
Samples: 4
Max nTPM: 252.2
Min nTPM: 166.9
RHH5304_R3670
197.3
RHH5212_R3583
190.9
RHH5240_R3612
252.2
RHH5269_R3641
166.9
Memory CD4 T-cell Th2 nTPM: 202.0
Samples: 4
Max nTPM: 234.2
Min nTPM: 169.8
RHH5305_R3671
169.8
RHH5213_R3584
234.2
RHH5241_R3613
230.4
RHH5270_R3642
173.6
Naive CD4 T-cell nTPM: 103.7
Samples: 4
Max nTPM: 116.3
Min nTPM: 92.2
RHH5306_R3672
103.7
RHH5214_R3585
102.6
RHH5242_R3614
116.3
RHH5271_R3643
92.2
Naive CD8 T-cell nTPM: 116.8
Samples: 4
Max nTPM: 126.5
Min nTPM: 104.6
RHH5201_R3572
126.5
RHH5229_R3601
117.6
RHH5258_R3630
104.6
RHH5287_R3659
118.6
Non-Vd2 gdTCR nTPM: 259.1
Samples: 4
Max nTPM: 286.2
Min nTPM: 208.6
RHH5235_R3607
265.6
RHH5264_R3636
275.8
RHH5207_R3578
286.2
RHH5299_R3665
208.6
T-reg nTPM: 153.6
Samples: 4
Max nTPM: 193.5
Min nTPM: 133.5
RHH5301_R3667
133.5
RHH5237_R3609
193.5
RHH5266_R3638
148.4
RHH5209_R3580
138.8
Terminal effector memory CD4 T-cell nTPM: 251.8
Samples: 2
Max nTPM: 275.5
Min nTPM: 228.0
RHH5243_R3615
275.5
RHH5272_R3644
228.0
Terminal effector memory CD8 T-cell nTPM: 282.4
Samples: 4
Max nTPM: 318.2
Min nTPM: 262.4
RHH5232_R3604
318.2
RHH5204_R3575
262.4
RHH5261_R3633
286.0
RHH5296_R3662
263.1
Vd2 gdTCR nTPM: 213.3
Samples: 4
Max nTPM: 256.5
Min nTPM: 168.5
RHH5234_R3606
217.0
RHH5206_R3577
256.5
RHH5263_R3635
211.0
RHH5298_R3664
168.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
