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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
85.1
nTPM
Monaco:
439.5
nTPM
Schmiedel:
288.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
85.1
HPA sample
nTPM
gdT-cell nTPM: 75.0
Samples: 6
Max nTPM: 88.1
Min nTPM: 54.4
P10809_1007
59.6
P10809_1022
76.5
P10809_1041
84.0
P10809_1060
54.4
P10809_1077
88.1
P10809_1098
87.6
MAIT T-cell nTPM: 58.6
Samples: 6
Max nTPM: 82.1
Min nTPM: 33.2
P10809_1006
33.2
P10809_1024
51.5
P10809_1043
58.0
P10809_1062
51.5
P10809_1083
82.1
P10809_1097
75.5
Memory CD4 T-cell nTPM: 63.7
Samples: 6
Max nTPM: 83.1
Min nTPM: 40.1
P10809_1014
40.1
P10809_1026
59.1
P10809_1045
69.1
P10809_1064
83.1
P10809_1086
81.6
P10809_1113
48.9
Memory CD8 T-cell nTPM: 85.1
Samples: 5
Max nTPM: 103.3
Min nTPM: 45.2
P10809_1012
45.2
P10809_1027
89.2
P10809_1046
103.0
P10809_1065
103.3
P10809_1111
85.0
Naive CD4 T-cell nTPM: 41.0
Samples: 6
Max nTPM: 55.5
Min nTPM: 26.7
P10809_1015
26.7
P10809_1030
30.5
P10809_1049
55.5
P10809_1068
38.5
P10809_1085
52.1
P10809_1112
42.6
Naive CD8 T-cell nTPM: 69.7
Samples: 6
Max nTPM: 109.3
Min nTPM: 32.0
P10809_1016
32.0
P10809_1031
52.7
P10809_1050
86.2
P10809_1069
92.0
P10809_1087
109.3
P10809_1110
45.7
T-reg nTPM: 57.7
Samples: 6
Max nTPM: 91.8
Min nTPM: 36.0
P10809_1018
36.0
P10809_1037
57.7
P10809_1056
59.3
P10809_1075
59.0
P10809_1094
42.2
P10809_1106
91.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
439.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 298.8
Samples: 4
Max nTPM: 413.0
Min nTPM: 187.5
RHH5202_R3573
267.7
RHH5230_R3602
413.0
RHH5259_R3631
187.5
RHH5288_R3660
326.9
Effector memory CD8 T-cell nTPM: 384.4
Samples: 4
Max nTPM: 531.3
Min nTPM: 247.8
RHH5203_R3574
393.1
RHH5231_R3603
365.2
RHH5260_R3632
247.8
RHH5289_R3661
531.3
MAIT T-cell nTPM: 284.2
Samples: 4
Max nTPM: 379.0
Min nTPM: 177.6
RHH5233_R3605
314.0
RHH5205_R3576
177.6
RHH5262_R3634
266.2
RHH5297_R3663
379.0
Memory CD4 T-cell TFH nTPM: 262.7
Samples: 4
Max nTPM: 371.7
Min nTPM: 199.6
RHH5300_R3666
273.2
RHH5236_R3608
371.7
RHH5265_R3637
206.3
RHH5208_R3579
199.6
Memory CD4 T-cell Th1 nTPM: 253.9
Samples: 4
Max nTPM: 337.5
Min nTPM: 183.7
RHH5210_R3581
183.7
RHH5302_R3668
337.5
RHH5238_R3610
254.6
RHH5267_R3639
239.7
Memory CD4 T-cell Th1/Th17 nTPM: 229.5
Samples: 4
Max nTPM: 338.3
Min nTPM: 129.6
RHH5303_R3669
338.3
RHH5211_R3582
129.6
RHH5239_R3611
225.8
RHH5268_R3640
224.2
Memory CD4 T-cell Th17 nTPM: 193.0
Samples: 4
Max nTPM: 273.8
Min nTPM: 123.3
RHH5304_R3670
273.8
RHH5212_R3583
123.3
RHH5240_R3612
188.1
RHH5269_R3641
186.6
Memory CD4 T-cell Th2 nTPM: 276.4
Samples: 4
Max nTPM: 335.2
Min nTPM: 243.7
RHH5305_R3671
278.5
RHH5213_R3584
248.1
RHH5241_R3613
335.2
RHH5270_R3642
243.7
Naive CD4 T-cell nTPM: 222.4
Samples: 4
Max nTPM: 286.7
Min nTPM: 166.3
RHH5306_R3672
286.7
RHH5214_R3585
166.3
RHH5242_R3614
252.9
RHH5271_R3643
183.5
Naive CD8 T-cell nTPM: 201.0
Samples: 4
Max nTPM: 255.5
Min nTPM: 174.8
RHH5201_R3572
178.8
RHH5229_R3601
174.8
RHH5258_R3630
194.9
RHH5287_R3659
255.5
Non-Vd2 gdTCR nTPM: 359.0
Samples: 4
Max nTPM: 454.1
Min nTPM: 266.5
RHH5235_R3607
401.3
RHH5264_R3636
266.5
RHH5207_R3578
314.0
RHH5299_R3665
454.1
T-reg nTPM: 232.9
Samples: 4
Max nTPM: 335.7
Min nTPM: 170.1
RHH5301_R3667
245.6
RHH5237_R3609
335.7
RHH5266_R3638
180.1
RHH5209_R3580
170.1
Terminal effector memory CD4 T-cell nTPM: 439.5
Samples: 2
Max nTPM: 559.8
Min nTPM: 319.1
RHH5243_R3615
559.8
RHH5272_R3644
319.1
Terminal effector memory CD8 T-cell nTPM: 436.3
Samples: 4
Max nTPM: 551.8
Min nTPM: 289.7
RHH5232_R3604
551.8
RHH5204_R3575
417.8
RHH5261_R3633
289.7
RHH5296_R3662
485.8
Vd2 gdTCR nTPM: 331.9
Samples: 4
Max nTPM: 398.9
Min nTPM: 244.9
RHH5234_R3606
398.9
RHH5206_R3577
295.0
RHH5263_R3635
244.9
RHH5298_R3664
388.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
