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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
893.0
nTPM
Monaco:
53.2
nTPM
Schmiedel:
137.1
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
893.0
HPA sample
nTPM
gdT-cell nTPM: 456.2
Samples: 6
Max nTPM: 618.6
Min nTPM: 268.0
P10809_1007
268.0
P10809_1022
419.4
P10809_1041
618.6
P10809_1060
439.3
P10809_1077
524.5
P10809_1098
467.4
MAIT T-cell nTPM: 504.7
Samples: 6
Max nTPM: 651.7
Min nTPM: 239.7
P10809_1006
239.7
P10809_1024
568.7
P10809_1043
604.0
P10809_1062
496.4
P10809_1083
467.9
P10809_1097
651.7
Memory CD4 T-cell nTPM: 622.1
Samples: 6
Max nTPM: 747.0
Min nTPM: 344.4
P10809_1014
344.4
P10809_1026
747.0
P10809_1045
641.5
P10809_1064
687.8
P10809_1086
630.4
P10809_1113
681.5
Memory CD8 T-cell nTPM: 587.5
Samples: 5
Max nTPM: 685.8
Min nTPM: 326.4
P10809_1012
326.4
P10809_1027
685.8
P10809_1046
582.9
P10809_1065
677.3
P10809_1111
665.0
Naive CD4 T-cell nTPM: 672.9
Samples: 6
Max nTPM: 1071.0
Min nTPM: 296.7
P10809_1015
296.7
P10809_1030
762.6
P10809_1049
1071.0
P10809_1068
626.7
P10809_1085
654.3
P10809_1112
626.1
Naive CD8 T-cell nTPM: 573.3
Samples: 6
Max nTPM: 679.5
Min nTPM: 343.4
P10809_1016
343.4
P10809_1031
597.0
P10809_1050
657.4
P10809_1069
679.5
P10809_1087
579.3
P10809_1110
583.1
T-reg nTPM: 893.0
Samples: 6
Max nTPM: 1434.7
Min nTPM: 411.1
P10809_1018
411.1
P10809_1037
846.0
P10809_1056
1434.7
P10809_1075
868.8
P10809_1094
895.7
P10809_1106
901.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
53.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 39.4
Samples: 4
Max nTPM: 55.5
Min nTPM: 31.4
RHH5202_R3573
31.4
RHH5230_R3602
31.5
RHH5259_R3631
55.5
RHH5288_R3660
39.3
Effector memory CD8 T-cell nTPM: 42.2
Samples: 4
Max nTPM: 54.1
Min nTPM: 23.5
RHH5203_R3574
38.3
RHH5231_R3603
52.7
RHH5260_R3632
54.1
RHH5289_R3661
23.5
MAIT T-cell nTPM: 35.7
Samples: 4
Max nTPM: 43.6
Min nTPM: 27.0
RHH5233_R3605
27.0
RHH5205_R3576
35.1
RHH5262_R3634
43.6
RHH5297_R3663
36.9
Memory CD4 T-cell TFH nTPM: 38.8
Samples: 4
Max nTPM: 65.0
Min nTPM: 27.4
RHH5300_R3666
31.6
RHH5236_R3608
65.0
RHH5265_R3637
27.4
RHH5208_R3579
31.2
Memory CD4 T-cell Th1 nTPM: 53.2
Samples: 4
Max nTPM: 62.7
Min nTPM: 35.8
RHH5210_R3581
35.8
RHH5302_R3668
62.7
RHH5238_R3610
59.7
RHH5267_R3639
54.7
Memory CD4 T-cell Th1/Th17 nTPM: 43.5
Samples: 4
Max nTPM: 55.4
Min nTPM: 27.8
RHH5303_R3669
41.2
RHH5211_R3582
49.5
RHH5239_R3611
27.8
RHH5268_R3640
55.4
Memory CD4 T-cell Th17 nTPM: 36.4
Samples: 4
Max nTPM: 38.3
Min nTPM: 35.1
RHH5304_R3670
35.1
RHH5212_R3583
38.3
RHH5240_R3612
35.6
RHH5269_R3641
36.4
Memory CD4 T-cell Th2 nTPM: 34.6
Samples: 4
Max nTPM: 40.3
Min nTPM: 28.4
RHH5305_R3671
40.2
RHH5213_R3584
40.3
RHH5241_R3613
28.4
RHH5270_R3642
29.4
Naive CD4 T-cell nTPM: 43.2
Samples: 4
Max nTPM: 57.0
Min nTPM: 30.1
RHH5306_R3672
41.0
RHH5214_R3585
57.0
RHH5242_R3614
30.1
RHH5271_R3643
44.5
Naive CD8 T-cell nTPM: 33.9
Samples: 4
Max nTPM: 47.4
Min nTPM: 22.8
RHH5201_R3572
22.8
RHH5229_R3601
36.1
RHH5258_R3630
29.4
RHH5287_R3659
47.4
Non-Vd2 gdTCR nTPM: 36.9
Samples: 4
Max nTPM: 42.9
Min nTPM: 30.6
RHH5235_R3607
30.6
RHH5264_R3636
33.0
RHH5207_R3578
42.9
RHH5299_R3665
41.0
T-reg nTPM: 43.0
Samples: 4
Max nTPM: 48.9
Min nTPM: 36.4
RHH5301_R3667
48.9
RHH5237_R3609
41.3
RHH5266_R3638
36.4
RHH5209_R3580
45.2
Terminal effector memory CD4 T-cell nTPM: 39.0
Samples: 2
Max nTPM: 39.6
Min nTPM: 38.4
RHH5243_R3615
38.4
RHH5272_R3644
39.6
Terminal effector memory CD8 T-cell nTPM: 52.8
Samples: 4
Max nTPM: 75.3
Min nTPM: 28.5
RHH5232_R3604
28.5
RHH5204_R3575
75.3
RHH5261_R3633
58.6
RHH5296_R3662
48.6
Vd2 gdTCR nTPM: 53.1
Samples: 4
Max nTPM: 85.3
Min nTPM: 34.5
RHH5234_R3606
34.5
RHH5206_R3577
85.3
RHH5263_R3635
46.7
RHH5298_R3664
45.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
