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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
147.5
nTPM
Monaco:
259.9
nTPM
Schmiedel:
17.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
147.5
HPA sample
nTPM
gdT-cell nTPM: 122.3
Samples: 6
Max nTPM: 164.2
Min nTPM: 103.0
P10809_1007
108.3
P10809_1022
124.4
P10809_1041
164.2
P10809_1060
114.4
P10809_1077
103.0
P10809_1098
119.2
MAIT T-cell nTPM: 140.9
Samples: 6
Max nTPM: 177.7
Min nTPM: 97.1
P10809_1006
155.8
P10809_1024
134.1
P10809_1043
177.7
P10809_1062
135.6
P10809_1083
97.1
P10809_1097
145.0
Memory CD4 T-cell nTPM: 132.1
Samples: 6
Max nTPM: 151.5
Min nTPM: 97.6
P10809_1014
138.9
P10809_1026
148.0
P10809_1045
151.5
P10809_1064
106.5
P10809_1086
97.6
P10809_1113
150.3
Memory CD8 T-cell nTPM: 129.0
Samples: 5
Max nTPM: 156.7
Min nTPM: 101.5
P10809_1012
144.8
P10809_1027
101.5
P10809_1046
156.7
P10809_1065
113.7
P10809_1111
128.5
Naive CD4 T-cell nTPM: 127.7
Samples: 6
Max nTPM: 152.6
Min nTPM: 103.4
P10809_1015
143.0
P10809_1030
103.4
P10809_1049
117.0
P10809_1068
125.7
P10809_1085
124.6
P10809_1112
152.6
Naive CD8 T-cell nTPM: 120.8
Samples: 6
Max nTPM: 143.3
Min nTPM: 96.6
P10809_1016
138.1
P10809_1031
96.6
P10809_1050
107.0
P10809_1069
140.8
P10809_1087
99.0
P10809_1110
143.3
T-reg nTPM: 147.5
Samples: 6
Max nTPM: 176.8
Min nTPM: 105.2
P10809_1018
162.3
P10809_1037
105.2
P10809_1056
154.2
P10809_1075
129.8
P10809_1094
156.8
P10809_1106
176.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
259.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 226.0
Samples: 4
Max nTPM: 298.2
Min nTPM: 131.9
RHH5202_R3573
216.8
RHH5230_R3602
298.2
RHH5259_R3631
257.2
RHH5288_R3660
131.9
Effector memory CD8 T-cell nTPM: 221.4
Samples: 4
Max nTPM: 243.5
Min nTPM: 188.9
RHH5203_R3574
243.5
RHH5231_R3603
234.2
RHH5260_R3632
188.9
RHH5289_R3661
218.8
MAIT T-cell nTPM: 251.5
Samples: 4
Max nTPM: 328.7
Min nTPM: 171.9
RHH5233_R3605
280.3
RHH5205_R3576
328.7
RHH5262_R3634
224.9
RHH5297_R3663
171.9
Memory CD4 T-cell TFH nTPM: 197.0
Samples: 4
Max nTPM: 242.0
Min nTPM: 154.1
RHH5300_R3666
154.1
RHH5236_R3608
242.0
RHH5265_R3637
183.6
RHH5208_R3579
208.4
Memory CD4 T-cell Th1 nTPM: 210.5
Samples: 4
Max nTPM: 254.6
Min nTPM: 142.8
RHH5210_R3581
234.8
RHH5302_R3668
142.8
RHH5238_R3610
254.6
RHH5267_R3639
209.6
Memory CD4 T-cell Th1/Th17 nTPM: 259.9
Samples: 4
Max nTPM: 384.8
Min nTPM: 176.8
RHH5303_R3669
176.8
RHH5211_R3582
280.6
RHH5239_R3611
384.8
RHH5268_R3640
197.2
Memory CD4 T-cell Th17 nTPM: 247.8
Samples: 4
Max nTPM: 329.3
Min nTPM: 203.9
RHH5304_R3670
203.9
RHH5212_R3583
230.6
RHH5240_R3612
329.3
RHH5269_R3641
227.5
Memory CD4 T-cell Th2 nTPM: 226.7
Samples: 4
Max nTPM: 267.1
Min nTPM: 154.3
RHH5305_R3671
154.3
RHH5213_R3584
262.9
RHH5241_R3613
267.1
RHH5270_R3642
222.4
Naive CD4 T-cell nTPM: 215.1
Samples: 4
Max nTPM: 257.3
Min nTPM: 160.5
RHH5306_R3672
160.5
RHH5214_R3585
209.6
RHH5242_R3614
257.3
RHH5271_R3643
232.9
Naive CD8 T-cell nTPM: 246.5
Samples: 4
Max nTPM: 327.0
Min nTPM: 189.7
RHH5201_R3572
258.6
RHH5229_R3601
327.0
RHH5258_R3630
210.5
RHH5287_R3659
189.7
Non-Vd2 gdTCR nTPM: 231.8
Samples: 4
Max nTPM: 304.2
Min nTPM: 140.9
RHH5235_R3607
292.7
RHH5264_R3636
189.4
RHH5207_R3578
304.2
RHH5299_R3665
140.9
T-reg nTPM: 209.1
Samples: 4
Max nTPM: 256.3
Min nTPM: 154.3
RHH5301_R3667
154.3
RHH5237_R3609
246.8
RHH5266_R3638
179.0
RHH5209_R3580
256.3
Terminal effector memory CD4 T-cell nTPM: 253.4
Samples: 2
Max nTPM: 312.2
Min nTPM: 194.5
RHH5243_R3615
312.2
RHH5272_R3644
194.5
Terminal effector memory CD8 T-cell nTPM: 203.2
Samples: 4
Max nTPM: 256.2
Min nTPM: 162.7
RHH5232_R3604
256.2
RHH5204_R3575
197.9
RHH5261_R3633
195.8
RHH5296_R3662
162.7
Vd2 gdTCR nTPM: 211.3
Samples: 4
Max nTPM: 258.5
Min nTPM: 134.6
RHH5234_R3606
258.5
RHH5206_R3577
225.2
RHH5263_R3635
227.0
RHH5298_R3664
134.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.