HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:73.9 nTPM
HPA Brain:123.7 nTPM
GTEx:73.9 nTPM
FANTOM5:306.2 Scaled Tags Per Million
Pig:48.2 nTPM
Mouse:25.2 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001397Antibody HPA012497
Glial cells Not detectedNot detected
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 123.7
Sample id Sample description nTPM
Hippocampus
nTPM: 74.0
2529 Female, age 94, left hemisphere 93.4
1911 Female, age 85, right hemisphere 91.1
2621 Female, age 67, right hemisphere 68.2
1898 Male, age 80, left hemisphere 66.5
2148 Female, age 91, left hemisphere 63.5
1855 Male, age 76, left hemisphere 61.5
Dentate gyrus
nTPM: 80.4
2530 Female, age 94, left hemisphere 153.1
2528 Male, age 74, both hemispheres 86.6
2010 Male, age 76, both hemispheres 75.6
2246 Female, age 85, both hemispheres 64.0
2531 Female, age 67, both hemispheres 54.8
1927 Female, age 91, both hemispheres 48.5
Entorhinal gyrus
nTPM: 93.0
2117 Female, age 91, right hemisphere 169.3
2764 Male, age 80, right hemisphere 114.5
2613 Female, age 94, left hemisphere 80.0
1938 Female, age 85, left hemisphere 68.4
1787 Male, age 76, left hemisphere 64.2
2686 Male, age 75, right hemisphere 61.6
Hippocampus, CA1
nTPM: 57.5
2082 Female, age 91, right hemisphere 75.9
2527 Male, age 74, both hemispheres 71.9
1873 Female, age 85, both hemispheres 61.1
2749 Male, age 80, left hemisphere 60.7
2045 Male, age 76, both hemispheres 18.0
Hippocampus, CA2
nTPM: 82.9
1963 Male, age 80, left hemisphere 103.6
2249 Male, age 74, both hemispheres 98.0
2437 Female, age 94, left hemisphere 92.3
2113 Female, age 91, right hemisphere 80.7
1940 Female, age 85, left hemisphere 75.5
1892 Male, age 76, both hemispheres 47.4
Hippocampus, CA3
nTPM: 50.4
1891 Female, age 85, both hemispheres 117.8
1867 Male, age 76, both hemispheres 57.8
2436 Male, age 74, both hemispheres 50.3
2137 Male, age 80, left hemisphere 35.1
2620 Female, age 94, left hemisphere 23.6
2861 Female, age 67, both hemispheres 18.0
Parahippocampal cortex
nTPM: 65.9
1990 Female, age 91, right hemisphere 102.8
2692 Male, age 74, both hemispheres 102.5
2532 Female, age 72, left hemisphere 92.9
1850 Male, age 80, both hemispheres 72.2
2245 Female, age 91, both hemispheres 66.1
1933 Female, age 85, both hemispheres 62.7
2018 Male, age 76, both hemispheres 50.7
2693 Female, age 94, both hemispheres 50.5
2250 Female, age 67, right hemisphere 36.8
2622 Female, age 67, right hemisphere 22.0
Perirhinal gyrus
nTPM: 45.5
2521 Female, age 94, right hemisphere 53.4
1847 Female, age 91, left hemisphere 47.5
2848 Male, age 76, right hemisphere 47.5
1794 Male, age 80, right hemisphere 44.2
1841 Female, age 85, right hemisphere 35.0
Subiculum
nTPM: 123.7
2042 Male, age 76, both hemispheres 181.0
1901 Male, age 80, both hemispheres 146.3
2438 Female, age 94, left hemisphere 125.8
1977 Female, age 85, both hemispheres 122.9
2619 Male, age 74, both hemispheres 86.3
2729 Female, age 91, right hemisphere 79.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 73.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 73.9
Samples: 197

Max nTPM: 249.7
Min nTPM: 3.9
Std nTPM: 48.6
Median nTPM: 61.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 249.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 239.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 233.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 225.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 193.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 190.6
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 187.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 186.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 186.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 180.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 179.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 306.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 306.2
FF:10153-102I9 76 years, female 310.3
FF:10169-103B7 60 years, female 302.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 48.2
Pig sample Sample description nTPM
Subiculum
nTPM: 23.9
Samples: 4

Max nTPM: 32.3
Min nTPM: 18.6
Sample A Female 32.3
Sample B Female 24.7
Sample C Male 18.6
Sample D Male 20.0
Dorsal hippocampus
nTPM: 48.2
Samples: 4

Max nTPM: 65.3
Min nTPM: 21.2
Sample A Female 65.3
Sample B Female 47.1
Sample C Male 59.2
Sample D Male 21.2
Entorhinal cortex
nTPM: 31.6
Samples: 4

Max nTPM: 34.1
Min nTPM: 25.5
Sample A Female 32.9
Sample B Female 34.1
Sample C Male 25.5
Sample D Male 34.0
Ventral hippocampus
nTPM: 34.5
Samples: 4

Max nTPM: 59.2
Min nTPM: 17.9
Sample A Female 30.9
Sample B Female 17.9
Sample C Male 30.0
Sample D Male 59.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.4
Samples: 4

Max nTPM: 25.7
Min nTPM: 17.6
Sample A Male 25.7
Sample B Male 19.8
Sample C Female 18.3
Sample D Female 17.6
Hippocampal formation
nTPM: 25.3
Samples: 4

Max nTPM: 38.4
Min nTPM: 15.6
Sample A Male 15.6
Sample B Male 25.8
Sample C Female 38.4
Sample D Female 21.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
73497519 Antisense, RP_051121_01_C04, Mouse strain C57BL/6J (56 days, male) 2.4

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