HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:21.4 nTPM
HPA Brain:17.5 nTPM
GTEx:21.4 nTPM
FANTOM5:11.9 Scaled Tags Per Million
Pig:3.4 nTPM
Mouse:16.0 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000603Antibody CAB025604
Glial cells Not detectedMedium
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.5
Sample id Sample description nTPM
Hippocampus
nTPM: 16.5
1898 Male, age 80, left hemisphere 19.4
1855 Male, age 76, left hemisphere 17.5
2529 Female, age 94, left hemisphere 17.0
2148 Female, age 91, left hemisphere 15.9
1911 Female, age 85, right hemisphere 15.3
2621 Female, age 67, right hemisphere 14.2
Dentate gyrus
nTPM: 17.5
2010 Male, age 76, both hemispheres 23.2
2530 Female, age 94, left hemisphere 19.5
1927 Female, age 91, both hemispheres 17.7
2528 Male, age 74, both hemispheres 16.8
2246 Female, age 85, both hemispheres 15.0
2531 Female, age 67, both hemispheres 12.7
Entorhinal gyrus
nTPM: 15.1
2117 Female, age 91, right hemisphere 19.5
1938 Female, age 85, left hemisphere 16.4
2764 Male, age 80, right hemisphere 15.0
1787 Male, age 76, left hemisphere 14.1
2613 Female, age 94, left hemisphere 13.7
2686 Male, age 75, right hemisphere 12.1
Hippocampus, CA1
nTPM: 15.4
1873 Female, age 85, both hemispheres 18.4
2749 Male, age 80, left hemisphere 18.4
2045 Male, age 76, both hemispheres 15.9
2527 Male, age 74, both hemispheres 14.5
2082 Female, age 91, right hemisphere 9.5
Hippocampus, CA2
nTPM: 16.8
1892 Male, age 76, both hemispheres 19.5
2249 Male, age 74, both hemispheres 18.8
1963 Male, age 80, left hemisphere 17.9
1940 Female, age 85, left hemisphere 15.5
2437 Female, age 94, left hemisphere 15.0
2113 Female, age 91, right hemisphere 13.8
Hippocampus, CA3
nTPM: 14.3
1867 Male, age 76, both hemispheres 20.5
2436 Male, age 74, both hemispheres 15.4
1891 Female, age 85, both hemispheres 14.0
2620 Female, age 94, left hemisphere 13.4
2137 Male, age 80, left hemisphere 12.3
2861 Female, age 67, both hemispheres 10.3
Parahippocampal cortex
nTPM: 14.0
1933 Female, age 85, both hemispheres 17.8
1990 Female, age 91, right hemisphere 15.3
2245 Female, age 91, both hemispheres 15.2
2250 Female, age 67, right hemisphere 15.2
2018 Male, age 76, both hemispheres 15.1
2532 Female, age 72, left hemisphere 14.6
2692 Male, age 74, both hemispheres 14.1
2622 Female, age 67, right hemisphere 12.6
1850 Male, age 80, both hemispheres 11.0
2693 Female, age 94, both hemispheres 9.1
Perirhinal gyrus
nTPM: 13.2
1847 Female, age 91, left hemisphere 15.0
1841 Female, age 85, right hemisphere 13.9
2521 Female, age 94, right hemisphere 13.9
1794 Male, age 80, right hemisphere 12.5
2848 Male, age 76, right hemisphere 10.5
Subiculum
nTPM: 15.1
1977 Female, age 85, both hemispheres 18.4
1901 Male, age 80, both hemispheres 16.4
2729 Female, age 91, right hemisphere 14.9
2438 Female, age 94, left hemisphere 13.9
2042 Male, age 76, both hemispheres 13.5
2619 Male, age 74, both hemispheres 13.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.4
Samples: 197

Max nTPM: 94.3
Min nTPM: 9.9
Std nTPM: 7.9
Median nTPM: 20.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 94.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 53.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 45.7
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 43.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 37.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 37.1
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 35.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 35.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 35.0
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 34.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 32.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.9
FF:10153-102I9 76 years, female 12.5
FF:10169-103B7 60 years, female 11.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 3.4
Pig sample Sample description nTPM
Subiculum
nTPM: 3.2
Samples: 4

Max nTPM: 4.3
Min nTPM: 2.8
Sample A Female 4.3
Sample B Female 2.8
Sample C Male 2.8
Sample D Male 3.0
Dorsal hippocampus
nTPM: 3.3
Samples: 4

Max nTPM: 4.1
Min nTPM: 2.5
Sample A Female 4.1
Sample B Female 2.8
Sample C Male 3.6
Sample D Male 2.5
Entorhinal cortex
nTPM: 3.5
Samples: 4

Max nTPM: 3.8
Min nTPM: 3.0
Sample A Female 3.8
Sample B Female 3.3
Sample C Male 3.7
Sample D Male 3.0
Ventral hippocampus
nTPM: 3.0
Samples: 4

Max nTPM: 3.6
Min nTPM: 2.1
Sample A Female 3.3
Sample B Female 2.1
Sample C Male 3.6
Sample D Male 2.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.8
Samples: 4

Max nTPM: 17.0
Min nTPM: 13.1
Sample A Male 14.5
Sample B Male 13.1
Sample C Female 17.0
Sample D Female 14.6
Hippocampal formation
nTPM: 16.0
Samples: 4

Max nTPM: 18.3
Min nTPM: 12.3
Sample A Male 12.3
Sample B Male 15.5
Sample C Female 18.3
Sample D Female 17.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
68920878 Antisense, RP_050303_01_D04, Mouse strain C57BL/6J (56 days, male) 2.1

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