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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
23.2
nTPM
Monaco:
35.7
nTPM
Schmiedel:
24.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
23.2
HPA sample
nTPM
gdT-cell nTPM: 17.2
Samples: 6
Max nTPM: 29.6
Min nTPM: 9.8
P10809_1007
29.6
P10809_1022
18.5
P10809_1041
9.8
P10809_1060
11.1
P10809_1077
16.2
P10809_1098
18.2
MAIT T-cell nTPM: 17.8
Samples: 6
Max nTPM: 34.0
Min nTPM: 6.4
P10809_1006
23.8
P10809_1024
6.4
P10809_1043
16.1
P10809_1062
12.3
P10809_1083
13.9
P10809_1097
34.0
Memory CD4 T-cell nTPM: 15.0
Samples: 6
Max nTPM: 21.6
Min nTPM: 6.9
P10809_1014
21.6
P10809_1026
17.3
P10809_1045
16.1
P10809_1064
20.2
P10809_1086
7.7
P10809_1113
6.9
Memory CD8 T-cell nTPM: 23.2
Samples: 5
Max nTPM: 34.8
Min nTPM: 12.6
P10809_1012
30.9
P10809_1027
12.6
P10809_1046
34.8
P10809_1065
17.3
P10809_1111
20.5
Naive CD4 T-cell nTPM: 12.5
Samples: 6
Max nTPM: 27.2
Min nTPM: 7.0
P10809_1015
11.7
P10809_1030
10.5
P10809_1049
27.2
P10809_1068
9.4
P10809_1085
8.9
P10809_1112
7.0
Naive CD8 T-cell nTPM: 10.3
Samples: 6
Max nTPM: 14.5
Min nTPM: 5.7
P10809_1016
9.6
P10809_1031
8.2
P10809_1050
14.5
P10809_1069
11.7
P10809_1087
5.7
P10809_1110
12.0
T-reg nTPM: 11.3
Samples: 6
Max nTPM: 22.7
Min nTPM: 1.0
P10809_1018
9.4
P10809_1037
17.9
P10809_1056
22.7
P10809_1075
5.0
P10809_1094
1.0
P10809_1106
11.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
35.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 18.4
Samples: 4
Max nTPM: 28.3
Min nTPM: 9.0
RHH5202_R3573
9.0
RHH5230_R3602
28.3
RHH5259_R3631
19.3
RHH5288_R3660
16.8
Effector memory CD8 T-cell nTPM: 35.7
Samples: 4
Max nTPM: 61.0
Min nTPM: 11.0
RHH5203_R3574
22.1
RHH5231_R3603
61.0
RHH5260_R3632
48.6
RHH5289_R3661
11.0
MAIT T-cell nTPM: 34.4
Samples: 4
Max nTPM: 49.3
Min nTPM: 17.0
RHH5233_R3605
39.8
RHH5205_R3576
17.0
RHH5262_R3634
49.3
RHH5297_R3663
31.6
Memory CD4 T-cell TFH nTPM: 21.5
Samples: 4
Max nTPM: 53.6
Min nTPM: 1.8
RHH5300_R3666
19.6
RHH5236_R3608
53.6
RHH5265_R3637
11.0
RHH5208_R3579
1.8
Memory CD4 T-cell Th1 nTPM: 20.6
Samples: 4
Max nTPM: 28.6
Min nTPM: 14.4
RHH5210_R3581
16.6
RHH5302_R3668
14.4
RHH5238_R3610
22.6
RHH5267_R3639
28.6
Memory CD4 T-cell Th1/Th17 nTPM: 21.4
Samples: 4
Max nTPM: 36.5
Min nTPM: 6.1
RHH5303_R3669
6.1
RHH5211_R3582
30.2
RHH5239_R3611
12.9
RHH5268_R3640
36.5
Memory CD4 T-cell Th17 nTPM: 24.3
Samples: 4
Max nTPM: 45.9
Min nTPM: 9.1
RHH5304_R3670
11.2
RHH5212_R3583
45.9
RHH5240_R3612
9.1
RHH5269_R3641
31.1
Memory CD4 T-cell Th2 nTPM: 23.0
Samples: 4
Max nTPM: 41.8
Min nTPM: 14.8
RHH5305_R3671
20.1
RHH5213_R3584
15.4
RHH5241_R3613
14.8
RHH5270_R3642
41.8
Naive CD4 T-cell nTPM: 20.6
Samples: 4
Max nTPM: 26.1
Min nTPM: 11.3
RHH5306_R3672
22.0
RHH5214_R3585
26.1
RHH5242_R3614
22.9
RHH5271_R3643
11.3
Naive CD8 T-cell nTPM: 13.0
Samples: 4
Max nTPM: 21.4
Min nTPM: 0.3
RHH5201_R3572
0.3
RHH5229_R3601
21.4
RHH5258_R3630
12.8
RHH5287_R3659
17.3
Non-Vd2 gdTCR nTPM: 25.8
Samples: 4
Max nTPM: 37.2
Min nTPM: 11.3
RHH5235_R3607
37.2
RHH5264_R3636
21.5
RHH5207_R3578
11.3
RHH5299_R3665
33.2
T-reg nTPM: 19.0
Samples: 4
Max nTPM: 36.0
Min nTPM: 9.4
RHH5301_R3667
17.4
RHH5237_R3609
36.0
RHH5266_R3638
13.3
RHH5209_R3580
9.4
Terminal effector memory CD4 T-cell nTPM: 19.0
Samples: 2
Max nTPM: 29.9
Min nTPM: 8.1
RHH5243_R3615
29.9
RHH5272_R3644
8.1
Terminal effector memory CD8 T-cell nTPM: 27.7
Samples: 4
Max nTPM: 54.5
Min nTPM: 12.3
RHH5232_R3604
24.4
RHH5204_R3575
19.7
RHH5261_R3633
54.5
RHH5296_R3662
12.3
Vd2 gdTCR nTPM: 27.0
Samples: 4
Max nTPM: 33.7
Min nTPM: 18.5
RHH5234_R3606
33.7
RHH5206_R3577
18.5
RHH5263_R3635
28.2
RHH5298_R3664
27.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
