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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
75.1
nTPM
Monaco:
131.1
nTPM
Schmiedel:
41.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
75.1
HPA sample
nTPM
gdT-cell nTPM: 64.3
Samples: 6
Max nTPM: 83.7
Min nTPM: 44.8
P10809_1007
44.8
P10809_1022
68.6
P10809_1041
70.9
P10809_1060
68.6
P10809_1077
49.0
P10809_1098
83.7
MAIT T-cell nTPM: 69.1
Samples: 6
Max nTPM: 99.2
Min nTPM: 48.5
P10809_1006
48.5
P10809_1024
63.0
P10809_1043
99.2
P10809_1062
64.9
P10809_1083
66.1
P10809_1097
72.6
Memory CD4 T-cell nTPM: 63.8
Samples: 6
Max nTPM: 74.6
Min nTPM: 46.5
P10809_1014
46.5
P10809_1026
65.1
P10809_1045
73.9
P10809_1064
74.6
P10809_1086
60.0
P10809_1113
62.7
Memory CD8 T-cell nTPM: 66.6
Samples: 5
Max nTPM: 91.4
Min nTPM: 49.7
P10809_1012
49.7
P10809_1027
56.6
P10809_1046
70.9
P10809_1065
64.2
P10809_1111
91.4
Naive CD4 T-cell nTPM: 56.8
Samples: 6
Max nTPM: 85.6
Min nTPM: 30.3
P10809_1015
30.3
P10809_1030
44.7
P10809_1049
85.6
P10809_1068
53.3
P10809_1085
58.0
P10809_1112
68.7
Naive CD8 T-cell nTPM: 53.5
Samples: 6
Max nTPM: 63.4
Min nTPM: 37.9
P10809_1016
37.9
P10809_1031
53.1
P10809_1050
47.1
P10809_1069
63.4
P10809_1087
59.8
P10809_1110
59.4
T-reg nTPM: 75.2
Samples: 6
Max nTPM: 109.0
Min nTPM: 47.0
P10809_1018
51.7
P10809_1037
47.0
P10809_1056
109.0
P10809_1075
77.9
P10809_1094
77.0
P10809_1106
88.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
131.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 82.6
Samples: 4
Max nTPM: 97.5
Min nTPM: 65.3
RHH5202_R3573
72.5
RHH5230_R3602
97.5
RHH5259_R3631
65.3
RHH5288_R3660
95.0
Effector memory CD8 T-cell nTPM: 117.9
Samples: 4
Max nTPM: 148.1
Min nTPM: 45.7
RHH5203_R3574
143.1
RHH5231_R3603
148.1
RHH5260_R3632
134.8
RHH5289_R3661
45.7
MAIT T-cell nTPM: 114.0
Samples: 4
Max nTPM: 125.1
Min nTPM: 102.3
RHH5233_R3605
109.4
RHH5205_R3576
102.3
RHH5262_R3634
125.1
RHH5297_R3663
119.0
Memory CD4 T-cell TFH nTPM: 92.7
Samples: 4
Max nTPM: 113.4
Min nTPM: 38.3
RHH5300_R3666
113.4
RHH5236_R3608
112.4
RHH5265_R3637
106.7
RHH5208_R3579
38.3
Memory CD4 T-cell Th1 nTPM: 91.5
Samples: 4
Max nTPM: 97.6
Min nTPM: 82.7
RHH5210_R3581
97.6
RHH5302_R3668
91.8
RHH5238_R3610
93.9
RHH5267_R3639
82.7
Memory CD4 T-cell Th1/Th17 nTPM: 103.1
Samples: 4
Max nTPM: 134.3
Min nTPM: 49.2
RHH5303_R3669
49.2
RHH5211_R3582
134.3
RHH5239_R3611
96.1
RHH5268_R3640
132.6
Memory CD4 T-cell Th17 nTPM: 107.8
Samples: 4
Max nTPM: 150.9
Min nTPM: 75.9
RHH5304_R3670
111.1
RHH5212_R3583
150.9
RHH5240_R3612
93.1
RHH5269_R3641
75.9
Memory CD4 T-cell Th2 nTPM: 101.2
Samples: 4
Max nTPM: 133.6
Min nTPM: 79.1
RHH5305_R3671
93.7
RHH5213_R3584
133.6
RHH5241_R3613
79.1
RHH5270_R3642
98.3
Naive CD4 T-cell nTPM: 96.5
Samples: 4
Max nTPM: 107.2
Min nTPM: 77.6
RHH5306_R3672
100.8
RHH5214_R3585
107.2
RHH5242_R3614
77.6
RHH5271_R3643
100.3
Naive CD8 T-cell nTPM: 76.0
Samples: 4
Max nTPM: 114.6
Min nTPM: 29.1
RHH5201_R3572
29.1
RHH5229_R3601
60.3
RHH5258_R3630
114.6
RHH5287_R3659
99.9
Non-Vd2 gdTCR nTPM: 126.7
Samples: 4
Max nTPM: 166.3
Min nTPM: 108.3
RHH5235_R3607
109.6
RHH5264_R3636
166.3
RHH5207_R3578
108.3
RHH5299_R3665
122.7
T-reg nTPM: 106.4
Samples: 4
Max nTPM: 135.8
Min nTPM: 86.7
RHH5301_R3667
108.2
RHH5237_R3609
135.8
RHH5266_R3638
86.7
RHH5209_R3580
95.0
Terminal effector memory CD4 T-cell nTPM: 125.0
Samples: 2
Max nTPM: 132.6
Min nTPM: 117.3
RHH5243_R3615
132.6
RHH5272_R3644
117.3
Terminal effector memory CD8 T-cell nTPM: 131.1
Samples: 4
Max nTPM: 156.5
Min nTPM: 75.9
RHH5232_R3604
156.5
RHH5204_R3575
137.9
RHH5261_R3633
154.2
RHH5296_R3662
75.9
Vd2 gdTCR nTPM: 126.0
Samples: 4
Max nTPM: 142.1
Min nTPM: 114.5
RHH5234_R3606
114.5
RHH5206_R3577
142.1
RHH5263_R3635
119.2
RHH5298_R3664
128.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
