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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
45.3
nTPM
Monaco:
17.7
nTPM
Schmiedel:
44.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
45.3
HPA sample
nTPM
gdT-cell nTPM: 27.3
Samples: 6
Max nTPM: 37.5
Min nTPM: 17.4
P10809_1007
17.4
P10809_1022
28.7
P10809_1041
37.5
P10809_1060
25.1
P10809_1077
25.0
P10809_1098
29.9
MAIT T-cell nTPM: 36.2
Samples: 6
Max nTPM: 44.8
Min nTPM: 21.7
P10809_1006
21.7
P10809_1024
43.9
P10809_1043
35.0
P10809_1062
35.4
P10809_1083
36.6
P10809_1097
44.8
Memory CD4 T-cell nTPM: 32.9
Samples: 6
Max nTPM: 41.0
Min nTPM: 24.4
P10809_1014
24.4
P10809_1026
41.0
P10809_1045
33.9
P10809_1064
30.1
P10809_1086
28.1
P10809_1113
39.7
Memory CD8 T-cell nTPM: 27.4
Samples: 5
Max nTPM: 34.0
Min nTPM: 20.9
P10809_1012
25.1
P10809_1027
26.7
P10809_1046
30.3
P10809_1065
20.9
P10809_1111
34.0
Naive CD4 T-cell nTPM: 45.3
Samples: 6
Max nTPM: 58.8
Min nTPM: 25.6
P10809_1015
25.6
P10809_1030
46.2
P10809_1049
58.8
P10809_1068
51.7
P10809_1085
38.6
P10809_1112
50.8
Naive CD8 T-cell nTPM: 36.5
Samples: 6
Max nTPM: 47.9
Min nTPM: 23.0
P10809_1016
34.3
P10809_1031
36.0
P10809_1050
35.2
P10809_1069
42.3
P10809_1087
23.0
P10809_1110
47.9
T-reg nTPM: 30.8
Samples: 6
Max nTPM: 55.3
Min nTPM: 11.7
P10809_1018
11.7
P10809_1037
24.1
P10809_1056
55.3
P10809_1075
32.0
P10809_1094
41.4
P10809_1106
20.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
17.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 10.1
Samples: 4
Max nTPM: 11.9
Min nTPM: 7.3
RHH5202_R3573
10.5
RHH5230_R3602
7.3
RHH5259_R3631
11.9
RHH5288_R3660
10.6
Effector memory CD8 T-cell nTPM: 7.5
Samples: 4
Max nTPM: 10.1
Min nTPM: 3.8
RHH5203_R3574
3.8
RHH5231_R3603
6.5
RHH5260_R3632
10.1
RHH5289_R3661
9.5
MAIT T-cell nTPM: 13.9
Samples: 4
Max nTPM: 30.1
Min nTPM: 2.1
RHH5233_R3605
9.9
RHH5205_R3576
2.1
RHH5262_R3634
30.1
RHH5297_R3663
13.5
Memory CD4 T-cell TFH nTPM: 15.0
Samples: 4
Max nTPM: 28.4
Min nTPM: 6.5
RHH5300_R3666
13.9
RHH5236_R3608
28.4
RHH5265_R3637
11.1
RHH5208_R3579
6.5
Memory CD4 T-cell Th1 nTPM: 13.7
Samples: 4
Max nTPM: 26.5
Min nTPM: 1.7
RHH5210_R3581
26.5
RHH5302_R3668
16.8
RHH5238_R3610
1.7
RHH5267_R3639
9.9
Memory CD4 T-cell Th1/Th17 nTPM: 11.1
Samples: 4
Max nTPM: 20.6
Min nTPM: 3.9
RHH5303_R3669
20.6
RHH5211_R3582
11.9
RHH5239_R3611
3.9
RHH5268_R3640
8.1
Memory CD4 T-cell Th17 nTPM: 6.7
Samples: 4
Max nTPM: 10.3
Min nTPM: 1.2
RHH5304_R3670
6.7
RHH5212_R3583
10.3
RHH5240_R3612
8.4
RHH5269_R3641
1.2
Memory CD4 T-cell Th2 nTPM: 17.7
Samples: 4
Max nTPM: 25.0
Min nTPM: 14.1
RHH5305_R3671
15.6
RHH5213_R3584
25.0
RHH5241_R3613
15.9
RHH5270_R3642
14.1
Naive CD4 T-cell nTPM: 13.4
Samples: 4
Max nTPM: 19.7
Min nTPM: 9.1
RHH5306_R3672
19.7
RHH5214_R3585
14.8
RHH5242_R3614
10.0
RHH5271_R3643
9.1
Naive CD8 T-cell nTPM: 9.7
Samples: 4
Max nTPM: 18.3
Min nTPM: 3.6
RHH5201_R3572
6.1
RHH5229_R3601
3.6
RHH5258_R3630
18.3
RHH5287_R3659
10.9
Non-Vd2 gdTCR nTPM: 7.2
Samples: 4
Max nTPM: 9.5
Min nTPM: 1.8
RHH5235_R3607
1.8
RHH5264_R3636
8.5
RHH5207_R3578
9.5
RHH5299_R3665
9.0
T-reg nTPM: 14.2
Samples: 4
Max nTPM: 23.8
Min nTPM: 6.3
RHH5301_R3667
23.8
RHH5237_R3609
12.1
RHH5266_R3638
6.3
RHH5209_R3580
14.6
Terminal effector memory CD4 T-cell nTPM: 9.8
Samples: 2
Max nTPM: 12.3
Min nTPM: 7.3
RHH5243_R3615
7.3
RHH5272_R3644
12.3
Terminal effector memory CD8 T-cell nTPM: 6.5
Samples: 4
Max nTPM: 10.0
Min nTPM: 3.2
RHH5232_R3604
3.2
RHH5204_R3575
10.0
RHH5261_R3633
7.2
RHH5296_R3662
5.5
Vd2 gdTCR nTPM: 8.6
Samples: 4
Max nTPM: 12.9
Min nTPM: 5.3
RHH5234_R3606
5.3
RHH5206_R3577
5.5
RHH5263_R3635
10.8
RHH5298_R3664
12.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
