HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:21.2 nTPM
HPA Brain:9.8 nTPM
GTEx:21.2 nTPM
FANTOM5:8.4 Scaled Tags Per Million
Pig:16.2 nTPM
Mouse:41.0 nTPM
Allen mouse:7.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003281
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.8
Sample id Sample description nTPM
Hippocampus
nTPM: 7.5
2529 Female, age 94, left hemisphere 10.4
2148 Female, age 91, left hemisphere 8.3
1855 Male, age 76, left hemisphere 7.8
1911 Female, age 85, right hemisphere 6.9
2621 Female, age 67, right hemisphere 6.8
1898 Male, age 80, left hemisphere 5.0
Dentate gyrus
nTPM: 8.1
2530 Female, age 94, left hemisphere 14.9
2528 Male, age 74, both hemispheres 8.7
2246 Female, age 85, both hemispheres 8.4
2531 Female, age 67, both hemispheres 6.9
1927 Female, age 91, both hemispheres 5.8
2010 Male, age 76, both hemispheres 4.0
Entorhinal gyrus
nTPM: 9.8
1787 Male, age 76, left hemisphere 12.0
2613 Female, age 94, left hemisphere 11.2
2117 Female, age 91, right hemisphere 10.1
2686 Male, age 75, right hemisphere 8.8
1938 Female, age 85, left hemisphere 8.5
2764 Male, age 80, right hemisphere 8.1
Hippocampus, CA1
nTPM: 6.0
2527 Male, age 74, both hemispheres 7.5
2082 Female, age 91, right hemisphere 6.5
2045 Male, age 76, both hemispheres 5.5
1873 Female, age 85, both hemispheres 5.3
2749 Male, age 80, left hemisphere 5.1
Hippocampus, CA2
nTPM: 7.5
2437 Female, age 94, left hemisphere 13.3
1940 Female, age 85, left hemisphere 8.0
1892 Male, age 76, both hemispheres 7.0
2249 Male, age 74, both hemispheres 6.9
1963 Male, age 80, left hemisphere 5.5
2113 Female, age 91, right hemisphere 4.4
Hippocampus, CA3
nTPM: 7.7
2861 Female, age 67, both hemispheres 10.6
2436 Male, age 74, both hemispheres 10.0
2137 Male, age 80, left hemisphere 9.4
1867 Male, age 76, both hemispheres 6.0
2620 Female, age 94, left hemisphere 5.8
1891 Female, age 85, both hemispheres 4.4
Parahippocampal cortex
nTPM: 8.2
2692 Male, age 74, both hemispheres 11.5
2622 Female, age 67, right hemisphere 10.1
2245 Female, age 91, both hemispheres 8.7
2250 Female, age 67, right hemisphere 8.6
2532 Female, age 72, left hemisphere 8.5
1850 Male, age 80, both hemispheres 7.3
1990 Female, age 91, right hemisphere 7.3
1933 Female, age 85, both hemispheres 6.8
2693 Female, age 94, both hemispheres 6.5
2018 Male, age 76, both hemispheres 6.4
Perirhinal gyrus
nTPM: 9.3
1794 Male, age 80, right hemisphere 11.7
2848 Male, age 76, right hemisphere 11.1
2521 Female, age 94, right hemisphere 8.1
1847 Female, age 91, left hemisphere 8.0
1841 Female, age 85, right hemisphere 7.4
Subiculum
nTPM: 8.6
2619 Male, age 74, both hemispheres 13.6
2438 Female, age 94, left hemisphere 12.6
1977 Female, age 85, both hemispheres 8.6
1901 Male, age 80, both hemispheres 6.3
2729 Female, age 91, right hemisphere 5.9
2042 Male, age 76, both hemispheres 4.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.2
Samples: 197

Max nTPM: 95.5
Min nTPM: 6.7
Std nTPM: 11.5
Median nTPM: 18.1
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 95.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 76.0
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 70.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 63.5
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 60.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 49.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 45.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 45.1
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 42.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 40.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 37.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 8.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.4
FF:10153-102I9 76 years, female 9.6
FF:10169-103B7 60 years, female 7.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.2
Pig sample Sample description nTPM
Subiculum
nTPM: 15.7
Samples: 4

Max nTPM: 22.6
Min nTPM: 12.6
Sample A Female 22.6
Sample B Female 14.4
Sample C Male 13.1
Sample D Male 12.6
Dorsal hippocampus
nTPM: 11.1
Samples: 4

Max nTPM: 13.5
Min nTPM: 8.7
Sample A Female 13.5
Sample B Female 10.6
Sample C Male 11.7
Sample D Male 8.7
Entorhinal cortex
nTPM: 16.2
Samples: 4

Max nTPM: 19.4
Min nTPM: 12.1
Sample A Female 19.4
Sample B Female 12.1
Sample C Male 15.4
Sample D Male 17.8
Ventral hippocampus
nTPM: 13.1
Samples: 4

Max nTPM: 14.9
Min nTPM: 10.6
Sample A Female 10.6
Sample B Female 12.9
Sample C Male 14.9
Sample D Male 13.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 41.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 41.0
Samples: 4

Max nTPM: 44.0
Min nTPM: 37.3
Sample A Male 39.2
Sample B Male 43.4
Sample C Female 37.3
Sample D Female 44.0
Hippocampal formation
nTPM: 29.6
Samples: 4

Max nTPM: 33.8
Min nTPM: 25.4
Sample A Male 30.5
Sample B Male 28.7
Sample C Female 25.4
Sample D Female 33.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.1
71735828 Antisense, RP_051010_03_C02, Mouse strain C57BL/6J (56 days, male) 7.1

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