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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
34.9
nTPM
GTEx:
34.9
nTPM
FANTOM5:
121.5
Scaled Tags Per Million
Pig:
84.9
nTPM
Mouse:
356.7
nTPM
RETINA - Annotated protein expression
Pending normal tissue analysis
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
34.9
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 34.9
Samples: 105
Max nTPM: 169.2
Min nTPM: 7.4
Std nTPM: 22.4
Median nTPM: 0.0
218_1
71 years, female
169.2
322_1
76 years, male
88.9
307_1
66 years, female
83.3
356_1
87 years, female
82.5
173_1
67 years, male
79.7
293_1
68 years, female
76.1
2_1
77 years, female
75.8
41_1
94 years, female
72.0
237_1
82 years, male
70.0
447_1
81 years, male
68.7
317_1
60 years, male
68.5
452_1
88 years, female
63.7
347_1
72 years, male
62.7
319_1
81 years, male
58.3
354_1
81 years, female
52.5
311_1
78 years, male
51.2
495_1
57 years, female
51.2
384_1
83 years, male
50.7
308_1
70 years, female
50.2
379_1
60 years, male
49.0
321_1
62 years, female
48.3
313_1
79 years, female
47.3
353_1
82 years, female
46.9
295_1
61 years, female
45.8
348_1
84 years, male
45.6
4_1
88 years, female
45.3
254_1
77 years, female
44.7
350_1
84 years, female
43.4
386_1
76 years, male
40.0
6_1
73 years, female
37.9
349_1
83 years, male
37.6
351_1
91 years, male
37.2
42_1
85 years, male
34.3
352_1
62 years, male
34.1
375_1
74 years, female
34.1
35_1
74 years, female
33.9
394_1
75 years, female
33.6
163_1
78 years, male
33.2
119_1
70 years, female
33.0
139_1
64 years, female
32.9
117_1
61 years, male
32.8
404_1
82 years, female
32.7
17_1
71 years, male
32.5
320_1
89 years, female
32.2
480_1
63 years, male
32.1
264_1
73 years, female
31.4
189_1
76 years, male
30.9
89_1
63 years, male
29.9
490_1
67 years, female
29.2
292_1
71 years, male
28.5
377_1
82 years, female
28.4
145_1
84 years, male
27.9
314_1
67 years, male
27.9
406_1
79 years, male
27.7
316_1
62 years, male
27.1
265_1
87 years, male
27.0
286_1
68 years, female
26.8
172_1
72 years, female
26.4
526_1
61 years, male
26.4
99_1
64 years, male
26.3
246_1
77 years, male
25.8
376_1
75 years, female
25.4
177_1
74 years, male
25.2
491_1
89 years, female
25.0
18_1
88 years, male
24.4
315_1
62 years, female
23.4
425_1
59 years, female
23.2
355_1
70 years, female
22.8
153_1
70 years, female
21.9
162_1
79 years, female
21.8
229_1
69 years, female
21.8
389_1
86 years, female
21.3
396_1
62 years, male
21.1
137_1
83 years, male
21.0
415_1
77 years, female
21.0
506_1
65 years, male
21.0
109_1
81 years, female
20.8
405_1
91 years, male
20.7
503_1
68 years, male
20.3
324_1
76 years, male
20.1
468_1
89 years, male
20.0
115_1
83 years, male
19.8
414_1
84 years, female
19.8
126_1
63 years, male
19.5
243_1
75 years, male
19.1
120_1
70 years, female
19.0
288_1
66 years, female
19.0
251_1
78 years, male
18.9
291_1
76 years, male
18.9
9_1
66 years, female
17.3
266_1
85 years, male
17.2
499_1
55 years, female
17.2
501_1
88 years, male
17.0
32_1
67 years, male
16.8
318_1
68 years, male
16.5
518_1
75 years, female
16.4
466_1
57 years, female
16.3
43_1
64 years, female
16.2
517_1
88 years, male
16.1
335_1
73 years, female
16.0
142_1
61 years, female
14.9
81_1
67 years, male
12.9
217_1
76 years, male
12.7
413_1
59 years, female
11.1
149_1
88 years, male
7.4
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.